9G7T | pdb_00009g7t

Solution NMR structure of a peptide encompassing residues 967-991 of the human formin INF2


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

wwPDB Validation 3D Report Full Report

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Literature

Structural and functional dissection of the WH2/DAD motif of INF2, a formin linked to human inherited degenerative disorders.

Labat-de-Hoz, L.Fernandez-Martin, L.Morales, P.Correas, I.Jimenez, M.A.Alonso, M.A.

(2026) FEBS J 293: 825-841

  • DOI: https://doi.org/10.1111/febs.70271
  • Primary Citation Related Structures: 
    9G7T, 9RWF

  • PubMed Abstract: 

    Inverted formin-2 (INF2), a formin linked to inherited renal and neurological disorders, exhibits pathogenic variants that lead to deregulated actin polymerization and nuclear aberrations, ultimately compromising cell viability. Most formins contain a diaphanous autoregulatory domain (DAD) and a diaphanous inhibitory domain (DID), which interact to keep the molecule in an inactive state. The DAD consists of a short sequence with an N-terminal region rich in hydrophobic residues and a C-terminal segment abundant in basic residues, resembling WASP homology 2 (WH2) actin-binding domains. Based on its sequence and actin-binding ability, the DAD of INF2 qualifies as a WH2 motif. In this study, we investigated the structure of the INF2 WH2/DAD by nuclear magnetic resonance (NMR) and explored its functional role. Our analysis revealed that the WH2/DAD forms a single α-helix in both H 2 O and 30% 2,2,2-trifluoroethanol that differs from the conformations observed in WH2-actin and DAD-DID crystal structures. Cells expressing INF2 containing only the hydrophobic region of the WH2/DAD exhibited higher F-actin levels and frequencies of nuclear abnormalities, phenocopying the effect of pathogenic INF2 DID variants. In contrast, deletion of the entire WH2/DAD, or of the hydrophobic region alone, abolishes INF2 activity. Neither these deletions nor WH2/DAD variants carrying naturally occurring missense mutations induced any detectable nuclear effects. These findings suggest that the WH2/DAD undergoes a conformational change to facilitate actin binding and that the hydrophobic region is essential for INF2-mediated actin polymerization. INF2 WH2/DAD variants with deleterious cellular effects appear to be rare in, or absent from, the human population.


  • Organizational Affiliation
    • Centro de Biología Molecular Severo Ochoa (CBMSO), Consejo Superior de Investigaciones Científicas (CSIC) and Universidad Autónoma de Madrid (UAM), Spain.

Macromolecule Content 

  • Total Structure Weight: 2.89 kDa 
  • Atom Count: 200 
  • Modeled Residue Count: 25 
  • Deposited Residue Count: 27 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Inverted formin-227Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for Q27J81 (Homo sapiens)
Explore Q27J81 
Go to UniProtKB:  Q27J81
PHAROS:  Q27J81
GTEx:  ENSG00000203485 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ27J81
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

Structure Validation

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Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Comunidad de MadridSpainB2017/BMD-3817

Revision History  (Full details and data files)

  • Version 1.0: 2025-11-26
    Type: Initial release
  • Version 1.1: 2026-02-18
    Changes: Database references