Nanobody-mediated activation and inhibition of Staphylococcus aureus MazF
Prolic-Kalinsek, M., Zorzini, V., Haesaerts, S., De Bruyn, P., Loris, R.To be published.
Experimental Data Snapshot
Starting Models: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Endoribonuclease MazF | 133 | Staphylococcus aureus | Mutation(s): 0  Gene Names: mazF, SA1873 EC: 3.1 | ||
UniProt | |||||
Find proteins for Q7A4G9 (Staphylococcus aureus (strain N315)) Explore Q7A4G9  Go to UniProtKB:  Q7A4G9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q7A4G9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Nanobody 5 | 131 | Lama glama | Mutation(s): 0  | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TRS Query on TRS | E [auth C] | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C4 H12 N O3 LENZDBCJOHFCAS-UHFFFAOYSA-O |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 50.6 | α = 67.502 |
b = 50.873 | β = 79.804 |
c = 52.083 | γ = 85.349 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XDS | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Vrije Universiteit Brussel | Belgium | SRP13 |