9EUG | pdb_00009eug

Cryo-EM structure of Staphylococcus aureus bacteriophage phi812 baseplate in the pre-contraction state - core, wedge module, and proximal tail proteins

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.50 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history. 


Literature

Cell attachment and tail contraction of S. aureus phage phi812

Binovsky, J., Siborova, M., Baska, R., Pichel-Beleiro, A., Skubnik, K., Novacek, J., van Raaij, M.J., Plevka, P.

To be published.

Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
NlpC/P60 domain-containing protein295Staphylococcus phage 812Mutation(s): 0 
UniProt
Find proteins for A0A0U1UXW0 (Staphylococcus phage 812)
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Go to UniProtKB:  A0A0U1UXW0
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UniProt GroupA0A0U1UXW0
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
GP-PDE domain-containing protein848Staphylococcus phage 812Mutation(s): 0 
UniProt
Find proteins for A0A0U1WFD7 (Staphylococcus phage 812)
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UniProt GroupA0A0U1WFD7
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Baseplate component
C, D, I, K
348Staphylococcus phage 812Mutation(s): 0 
UniProt
Find proteins for Q4Z9Z9 (Staphylococcus phage G1)
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UniProt GroupQ4Z9Z9
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Peptidase C51 domain-containing protein808Staphylococcus phage 812Mutation(s): 0 
UniProt
Find proteins for A0A0U1X189 (Staphylococcus phage 812)
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UniProt GroupA0A0U1X189
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Baseplate component
F, G
174Staphylococcus phage 812Mutation(s): 0 
UniProt
Find proteins for A0A0U1UXD6 (Staphylococcus phage 812)
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UniProt GroupA0A0U1UXD6
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
TmpF
H, J
1,019Staphylococcus phage 812Mutation(s): 0 
UniProt
Find proteins for A0A0U1WGD3 (Staphylococcus phage 812)
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UniProt GroupA0A0U1WGD3
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Baseplate wedge subunit
L, O
234Staphylococcus phage 812Mutation(s): 0 
UniProt
Find proteins for Q4ZA00 (Staphylococcus phage G1)
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UniProt GroupQ4ZA00
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
Putative baseplate component
M, N
263Staphylococcus phage 812Mutation(s): 0 
UniProt
Find proteins for Q4ZA02 (Staphylococcus phage G1)
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UniProt GroupQ4ZA02
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
Major tail sheath protein
P, Q, T, U, X
P, Q, T, U, X, Y
587Staphylococcus phage 812Mutation(s): 0 
UniProt
Find proteins for A0A0U1WZ79 (Staphylococcus phage 812)
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UniProt GroupA0A0U1WZ79
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
Capsid protein142Staphylococcus phage 812Mutation(s): 0 
UniProt
Find proteins for Q4ZA15 (Staphylococcus phage G1)
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UniProt GroupQ4ZA15
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.50 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION3.1
MODEL REFINEMENTPHENIX

Structure Validation

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Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
European Research Council (ERC)European Union101043452
Other governmentCzech RepublicLX22NP05103

Revision History  (Full details and data files)

  • Version 1.0: 2025-04-09
    Type: Initial release