9DP6

Mycolicibacterium smegmatis MmpL5-AcpM structure

• PDB DOI: https://doi.org/10.2210/pdb9DP6/pdb
• EM Map EMD-47097: EMDB EMDataResource

• Classification: TRANSPORT PROTEIN
• Organism(s): Mycolicibacterium smegmatis
• Expression System: Mycolicibacterium smegmatis
• Mutation(s): No 


• Deposited: 2024-09-20 Released: 2024-10-23 
• Deposition Author(s): Maharjan, R., Klenotic, P.A., Zhang, Z., Yu, E.W.
• Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 2.81 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Mycolicibacterium smegmatis MmpL5-AcpM structure

Maharjan, R., Klenotic, P.A., Zhang, Z., Yu, E.W.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 2-mer - A1B1 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 116.7 kDa 
• Atom Count: 6,241 
• Modelled Residue Count: 820 
• Deposited Residue Count: 1,066 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Meromycolate extension acyl carrier protein	A [auth B]	99	Mycolicibacterium smegmatis	Mutation(s): 0
UniProt
Find proteins for A0R0B3 (Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)) Go to UniProtKB:  A0R0B3

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
MmpL5 protein	B [auth A]	967	Mycolicibacterium smegmatis	Mutation(s): 0  Gene Names: MSMEG_1382
UniProt
Find proteins for A0QS80 (Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)) Go to UniProtKB:  A0QS80

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
PNS	C [auth B]	4'-PHOSPHOPANTETHEINE C11 H23 N2 O7 P S JDMUPRLRUUMCTL-VIFPVBQESA-N

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 2.81 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-10-23 
Deposition Author(s): Maharjan, R., Klenotic, P.A., Zhang, Z., Yu, E.W.

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Funding Organization	Location	Grant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	R01AI145069

Revision History  

• Version 1.0: 2024-10-23
  Type: Initial release