9B20

Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (AMP bound)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.164 
  • R-Value Observed: 0.166 

Starting Model: experimental
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Literature

Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (AMP bound)

Liu, L.Lovell, S.Buchko, G.W.Battaile, K.P.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
ADP-ribose pyrophosphatase
A, B
218Klebsiella pneumoniaeMutation(s): 0 
Gene Names: KPHS_45750
EC: 3.6.1.13
UniProt
Find proteins for A0A0H3GVQ7 (Klebsiella pneumoniae subsp. pneumoniae (strain HS11286))
Explore A0A0H3GVQ7 
Go to UniProtKB:  A0A0H3GVQ7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0H3GVQ7
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.164 
  • R-Value Observed: 0.166 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 49.91α = 90
b = 68.79β = 115.2
c = 56.663γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
Aimlessdata scaling
XDSdata reduction
PHASERphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United States75N93022C00036
National Institutes of Health/Office of the DirectorUnited StatesS10OD030394

Revision History  (Full details and data files)

  • Version 1.0: 2024-03-27
    Type: Initial release