8YAO | pdb_00008yao

Cryo-ET structure of huntingtin actin dimer complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 20.8 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SUBTOMOGRAM AVERAGING 

wwPDB Validation 3D Report Full Report

Validation slider image for 8YAO

This is version 1.2 of the entry. See complete history

Literature

Structure of the Huntingtin F-actin complex reveals its role in cytoskeleton organization.

Carpentier, R.Kim, J.Capizzi, M.Kim, H.Fassler, F.Hansen, J.M.Kim, M.J.Denarier, E.Blot, B.Degennaro, M.Labou, S.Arnal, I.Marcaida, M.J.Peraro, M.D.Kim, D.Schur, F.K.M.Song, J.J.Humbert, S.

(2025) Sci Adv 11: eadw4124-eadw4124

  • DOI: https://doi.org/10.1126/sciadv.adw4124
  • Primary Citation Related Structures: 
    8YAE, 8YAO

  • PubMed Abstract: 

    The Huntingtin protein (HTT), named for its role in Huntington's disease, has been best understood as a scaffolding protein that promotes vesicle transport by molecular motors along microtubules. Here, we show that HTT also interacts with the actin cytoskeleton, and its loss of function disturbs the morphology and function of the axonal growth cone. We demonstrate that HTT organizes F-actin into bundles. Cryo-electron tomography (cryo-ET) and subtomogram averaging (STA) structural analyses reveal that HTT's N-terminal HEAT and Bridge domains wrap around F-actin, while the C-terminal HEAT domain is displaced; furthermore, HTT dimerizes via the N-HEAT domain to bridge parallel actin filaments separated by ~20 nanometers. Our study provides the structural basis for understanding how HTT interacts with and organizes the actin cytoskeleton.


  • Organizational Affiliation
    • Univ. Grenoble Alpes, Inserm, U1216, CEA, Grenoble Institute Neurosciences, 38000 Grenoble, France.

Macromolecule Content 

  • Total Structure Weight: 1,784.68 kDa 
  • Atom Count: 98,880 
  • Modeled Residue Count: 12,626 
  • Deposited Residue Count: 16,038 
  • Unique protein chains: 2

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
HuntingtinA,
O [auth a]
3,144Homo sapiensMutation(s): 0 
Gene Names: HTTHDIT15
UniProt & NIH Common Fund Data Resources
Find proteins for P42858 (Homo sapiens)
Explore P42858 
Go to UniProtKB:  P42858
PHAROS:  P42858
GTEx:  ENSG00000197386 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP42858
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
Actin, alpha skeletal muscle375Oryctolagus cuniculusMutation(s): 0 
EC: 3.6.4
UniProt
Find proteins for P68135 (Oryctolagus cuniculus)
Explore P68135 
Go to UniProtKB:  P68135
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP68135
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 20.8 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SUBTOMOGRAM AVERAGING 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Research Foundation (NRF, Korea)Korea, Republic Of--

Revision History  (Full details and data files)

  • Version 1.0: 2025-08-13
    Type: Initial release
  • Version 1.1: 2025-08-27
    Changes: Data collection, Database references, Structure summary
  • Version 1.2: 2025-10-01
    Changes: Data collection, Database references