8Y4L | pdb_00008y4l

The ACID domain of aMED25

• PDB DOI: https://doi.org/10.2210/pdb8Y4L/pdb

• Classification: TRANSCRIPTION
• Organism(s): Arabidopsis thaliana
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2024-01-30 Released: 2025-02-05 
• Deposition Author(s): Xiong, Y., Zhu, J., Yang, Y.
• Funding Organization(s): National Natural Science Foundation of China (NSFC), Chinese Academy of Sciences

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

The ACID domain of aMED25

Xiong, Y., Zhu, J., Yang, Y.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: NMR Distance Restraints

Macromolecule Content 

• Total Structure Weight: 14.52 kDa 
• Atom Count: 1,017 
• Modeled Residue Count: 130 
• Deposited Residue Count: 130 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Mediator of RNA polymerase II transcription subunit 25	A	130	Arabidopsis thaliana	Mutation(s): 0  Gene Names: MED25, MED25_1, PFT1, At1g25540, F2J7.4
UniProt
Find proteins for Q7XYY2 (Arabidopsis thaliana) Explore Q7XYY2  Go to UniProtKB:  Q7XYY2

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2025-02-05 
Deposition Author(s): Xiong, Y., Zhu, J., Yang, Y.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	21991082
National Natural Science Foundation of China (NSFC)	China	21921004
Chinese Academy of Sciences	China	XDB0540203

Revision History  

• Version 1.0: 2025-02-05
  Type: Initial release