The crystal structure of AsfvTopII in complex with G-DNA
Yang, J., Gan, J.H.(2024) Nat Commun 
Experimental Data Snapshot
Starting Model: in silico
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA topoisomerase 2 | 784 | African swine fever virus BA71V | Mutation(s): 0  Gene Names: TOP, Ba71V-112, P1192R EC: 5.6.2.2 | ||
UniProt | |||||
Find proteins for Q00942 (African swine fever virus (strain Badajoz 1971 Vero-adapted)) Explore Q00942  Go to UniProtKB:  Q00942 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q00942 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MG (Subject of Investigation/LOI) Query on MG | G [auth A], H [auth A], I [auth A], J [auth B], K [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 135.77 | α = 90 |
b = 126.41 | β = 90 |
c = 135.69 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
xia2 | data scaling |
XDS | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Natural Science Foundation of China (NSFC) | China | -- |