Structure-Based Catalytic Mechanism of Amaryllidaceae O-Methyltransferases
Hnin, S.Y.Y., Nakashima, Y., Kodama, T., Morita, H.(2024) ACS Catal : 11865-11880
Experimental Data Snapshot
Starting Model: experimental
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(2024) ACS Catal : 11865-11880
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Norbelladine 4'-O-methyltransferase | 242 | Narcissus aff. pseudonarcissus MK-2014 | Mutation(s): 0  Gene Names: N4OMT EC: 2.1.1.336 | ||
UniProt | |||||
Find proteins for A0A077EWA5 (Narcissus aff. pseudonarcissus MK-2014) Explore A0A077EWA5  Go to UniProtKB:  A0A077EWA5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A077EWA5 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SAH (Subject of Investigation/LOI) Query on SAH | F [auth A], J [auth B], L [auth C], O [auth D] | S-ADENOSYL-L-HOMOCYSTEINE C14 H20 N6 O5 S ZJUKTBDSGOFHSH-WFMPWKQPSA-N | |||
H6N (Subject of Investigation/LOI) Query on H6N | G [auth A], M [auth C] | Protocatechuic aldehyde C7 H6 O3 IBGBGRVKPALMCQ-UHFFFAOYSA-N | |||
GOL (Subject of Investigation/LOI) Query on GOL | H [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
MG (Subject of Investigation/LOI) Query on MG | E [auth A], I [auth B], K [auth C], N [auth D] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 64.328 | α = 90 |
b = 79.901 | β = 93.862 |
c = 91.286 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Japan Society for the Promotion of Science (JSPS) | Japan | JP22H02777 |
Japan Society for the Promotion of Science (JSPS) | Japan | JP22K15303 |