8WZ2

Structure of 26RFa-pyroglutamylated RFamide peptide receptor complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.73 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


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Literature

Structural basis for recognition of 26RFa by the pyroglutamylated RFamide peptide receptor.

Jin, S.Guo, S.Xu, Y.Li, X.Wu, C.He, X.Pan, B.Xin, W.Zhang, H.Hu, W.Yin, Y.Zhang, T.Wu, K.Yuan, Q.Xu, H.E.Xie, X.Jiang, Y.

(2024) Cell Discov 10: 58-58

  • DOI: https://doi.org/10.1038/s41421-024-00670-3
  • Primary Citation of Related Structures:  
    8WZ2

  • PubMed Abstract: 

    The neuropeptide 26RFa, a member of the RF-amide peptide family, activates the pyroglutamylated RF-amide peptide receptor (QRFPR), a class A GPCR. The 26RFa/QRFPR system plays critical roles in energy homeostasis, making QRFPR an attractive drug target for treating obesity, diabetes, and eating disorders. However, the lack of structural information has hindered our understanding of the peptide recognition and regulatory mechanism of QRFPR, impeding drug design efforts. In this study, we determined the cryo-EM structure of the G q -coupled QRFPR bound to 26RFa. The structure reveals a unique assembly mode of the extracellular region of the receptor and the N-terminus of the peptide, and elucidates the recognition mechanism of the C-terminal heptapeptide of 26RFa by the transmembrane binding pocket of QRFPR. The study also clarifies the similarities and distinctions in the binding pattern of the RF-amide moiety in five RF-amide peptides and the RY-amide segment in neuropeptide Y. These findings deepen our understanding of the RF-amide peptide recognition, aiding in the rational design of drugs targeting QRFPR and other RF-amide peptide receptors.


  • Organizational Affiliation

    Lingang Laboratory, Shanghai, China.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
G-alpha q361Homo sapiensMutation(s): 0 
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1340Rattus norvegicusMutation(s): 0 
Gene Names: Gnb1
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Entity ID: 3
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scFV16C [auth E]247Homo sapiensMutation(s): 0 
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2D [auth G]71Bos taurusMutation(s): 0 
Gene Names: GNG2
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Orexigenic neuropeptide QRFPE [auth L]27Homo sapiensMutation(s): 0 
Gene Names: Qrfp
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Pyroglutamylated RF-amide peptide receptorF [auth R]431Homo sapiensMutation(s): 0 
Gene Names: QRFPR
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Find proteins for Q96P65 (Homo sapiens)
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PHAROS:  Q96P65
GTEx:  ENSG00000186867 
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.73 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China81902085

Revision History  (Full details and data files)

  • Version 1.0: 2024-06-19
    Type: Initial release