Crystal structures of RNA-dependent RNA polymerases from Jingmen tick virus and Alongshan virus
Liu, Z., Peng, Q., Han, P., Kuai, L., Qi, J., Shi, Y.(2024) hLife 2: 18-31
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
RNA polymerase | 620 | Amblyomma virus GXTV108 | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for A0A4P2RZ45 (Amblyomma virus GXTV108) Explore A0A4P2RZ45  Go to UniProtKB:  A0A4P2RZ45 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A4P2RZ45 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SE Query on SE | C [auth A] | SELENIUM ATOM Se SPVXKVOXSXTJOY-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 89.573 | α = 90 |
b = 61.446 | β = 104.64 |
c = 125.595 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
OASIS | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Natural Science Foundation of China (NSFC) | China | 81871658 |