8WIP

Crystal Structure of Pseudomonas aeruginosa SuhB in its apo form.

• PDB DOI: https://doi.org/10.2210/pdb8WIP/pdb

• Classification: HYDROLASE
• Organism(s): Pseudomonas aeruginosa PAO1
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): Yes 


• Deposited: 2023-09-25 Released: 2024-10-02 
• Deposition Author(s): Yadav, V.K., Maji, S., Shukla, M., Bhattacharyya, S.
• Funding Organization(s): Other government

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.60 Å
• R-Value Free: 0.247 
• R-Value Work: 0.207 
• R-Value Observed: 0.209 

Starting Model: experimental

Literature

Crystal Structure of Pseudomonas aeruginosa SuhB in its apo form.

Yadav, V.K., Maji, S., Shukla, M., Bhattacharyya, S.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 59.52 kDa 
• Atom Count: 4,306 
• Modelled Residue Count: 544 
• Deposited Residue Count: 546 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Nus factor SuhB	A, B	273	Pseudomonas aeruginosa PAO1	Mutation(s): 1  Gene Names: suhB EC: 3.1.3.25
UniProt
Find proteins for Q9HXI4 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9HXI4  Go to UniProtKB:  Q9HXI4

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
IMD	E [auth B]	IMIDAZOLE C3 H5 N2 RAXXELZNTBOGNW-UHFFFAOYSA-O
ACT	C [auth A], D [auth B]	ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.60 Å
• R-Value Free: 0.247 
• R-Value Work: 0.207 
• R-Value Observed: 0.209 
• Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 65.784	α = 90
b = 89.358	β = 90
c = 98.985	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
SCALA	data scaling
MOLREP	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-10-02 
Deposition Author(s): Yadav, V.K., Maji, S., Shukla, M., Bhattacharyya, S.

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Funding Organization	Location	Grant Number
Other government	India	S-12011/12/2021

Revision History  

• Version 1.0: 2024-10-02
  Type: Initial release