Crystal structure of Haloquadratum walsbyi middle rhodopsin at 2.5 Angstroms resolution.
Ko, L.N., Lim, G.Z., Ko, T., Yang, C.S.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Bacteriorhodopsin-II-like protein | 252 | Haloquadratum walsbyi DSM 16790 | Mutation(s): 0  Gene Names: bop2 | ||
UniProt | |||||
Find proteins for Q18DH5 (Haloquadratum walsbyi (strain DSM 16790 / HBSQ001)) Explore Q18DH5  Go to UniProtKB:  Q18DH5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q18DH5 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
RET (Subject of Investigation/LOI) Query on RET | C [auth A], D [auth B] | RETINAL C20 H28 O NCYCYZXNIZJOKI-OVSJKPMPSA-N | |||
MG (Subject of Investigation/LOI) Query on MG | E [auth B], F [auth B], G [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 61.46 | α = 90 |
b = 62.47 | β = 90 |
c = 122.35 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
XSCALE | data scaling |
XDS | data reduction |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
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Not funded | -- |