8VH3

CH505.M5.G458Y CE2 Design SOSIP

• PDB DOI: https://doi.org/10.2210/pdb8VH3/pdb
• EM Map EMD-43233: EMDB EMDataResource

• Classification: VIRAL PROTEIN
• Organism(s): Human immunodeficiency virus 1
• Expression System: Homo sapiens
• Mutation(s): No 


• Deposited: 2023-12-30 Released: 2024-10-02 
• Deposition Author(s): Henderson, R., Acharya, P.
• Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.90 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Engineering immunogens that select for specific mutations in HIV broadly neutralizing antibodies

Henderson, R., Haynes, B.F.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C3  (Explore in 3D)
Global Stoichiometry: Hetero 6-mer - A3B3 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 204.17 kDa 
• Atom Count: 13,572 
• Modelled Residue Count: 1,716 
• Deposited Residue Count: 1,809 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
CH505.CE2 SOSIP gp120	A, C [auth E], E [auth I]	456	Human immunodeficiency virus 1	Mutation(s): 0  Gene Names: env
UniProt
Find proteins for M4M3Q1 (Human immunodeficiency virus 1) Explore M4M3Q1  Go to UniProtKB:  M4M3Q1

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
CH505.CE2 SOSIP gp41	B [auth Z], D [auth F], F [auth J]	147	Human immunodeficiency virus 1	Mutation(s): 0  Gene Names: env
UniProt
Find proteins for M4M3Q1 (Human immunodeficiency virus 1) Explore M4M3Q1  Go to UniProtKB:  M4M3Q1

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.90 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-10-02 
Deposition Author(s): Henderson, R., Acharya, P.

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Funding Organization	Location	Grant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	DP2-AI164323
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	UM1AI144371
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	R01AI145687
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	U54AI170752

Revision History  

• Version 1.0: 2024-10-02
  Type: Initial release