8VCN | pdb_00008vcn

GluER mutant - W66F F269Y Q293T F68Y T36E P263L


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.47 Å
  • R-Value Free: 
    0.184 (Depositor), 0.183 (DCC) 
  • R-Value Work: 
    0.157 (Depositor), 0.157 (DCC) 
  • R-Value Observed: 
    0.159 (Depositor) 

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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Ligand Structure Quality Assessment 


This is version 1.2 of the entry. See complete history

Literature

Asymmetric Synthesis of alpha-Chloroamides via Photoenzymatic Hydroalkylation of Olefins.

Liu, Y.Bender, S.G.Sorigue, D.Diaz, D.J.Ellington, A.D.Mann, G.Allmendinger, S.Hyster, T.K.

(2024) J Am Chem Soc 146: 7191-7197

  • DOI: https://doi.org/10.1021/jacs.4c00927
  • Primary Citation Related Structures: 
    8VCN

  • PubMed Abstract: 

    Photoenzymatic intermolecular hydroalkylations of olefins are highly enantioselective for chiral centers formed during radical termination but poorly selective for centers set in the C-C bond-forming event. Here, we report the evolution of a flavin-dependent "ene"-reductase to catalyze the coupling of α,α-dichloroamides with alkenes to afford α-chloroamides in good yield with excellent chemo- and stereoselectivity. These products can serve as linchpins in the synthesis of pharmaceutically valuable motifs. Mechanistic studies indicate that radical formation occurs by exciting a charge-transfer complex templated by the protein. Precise control over the orientation of molecules within the charge-transfer complex potentially accounts for the observed stereoselectivity. The work expands the types of motifs that can be prepared using photoenzymatic catalysis.


  • Organizational Affiliation
    • Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States.

Macromolecule Content 

  • Total Structure Weight: 40.94 kDa 
  • Atom Count: 3,285 
  • Modeled Residue Count: 356 
  • Deposited Residue Count: 367 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
N-ethylmaleimide reductase367Gluconobacter oxydansMutation(s): 6 
Gene Names: noxAD934_01855AD950_09540EDC20_102158
UniProt
Find proteins for A1E8I9 (Gluconobacter oxydans)
Explore A1E8I9 
Go to UniProtKB:  A1E8I9
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA1E8I9
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.47 Å
  • R-Value Free:  0.184 (Depositor), 0.183 (DCC) 
  • R-Value Work:  0.157 (Depositor), 0.157 (DCC) 
  • R-Value Observed: 0.159 (Depositor) 
Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 54.887α = 90
b = 90.914β = 110.131
c = 74.872γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesR01GM127703-08

Revision History  (Full details and data files)

  • Version 1.0: 2024-03-13
    Type: Initial release
  • Version 1.1: 2024-03-20
    Changes: Database references
  • Version 1.2: 2024-03-27
    Changes: Database references