8UPP

Campylobacter jejuni ketol-acid reductoisomerase in complex with NADPH and Hoe704


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.78 Å
  • R-Value Free: 0.298 
  • R-Value Work: 0.264 
  • R-Value Observed: 0.265 

Starting Model: experimental
View more details

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Mapping of the Reaction Trajectory catalyzed by Class I Ketol-Acid Reductoisomerase

Lin, X.Lonhienne, T.Lv, Y.Kurz, J.McGeary, R.Schenk, G.Guddat, L.W.

(2024) ACS Catal 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Ketol-acid reductoisomerase330Campylobacter jejuniMutation(s): 0 
Gene Names: ilvCCW563_00670
EC: 1.1.1.86
UniProt
Find proteins for Q9PHN5 (Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168))
Explore Q9PHN5 
Go to UniProtKB:  Q9PHN5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9PHN5
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
NDP (Subject of Investigation/LOI)
Query on NDP

Download Ideal Coordinates CCD File 
BA [auth I]
DB [auth F]
EA [auth D]
HB [auth A]
IA [auth G]
BA [auth I],
DB [auth F],
EA [auth D],
HB [auth A],
IA [auth G],
NA [auth J],
O [auth B],
RA [auth E],
T [auth H],
UA [auth L],
X [auth K],
ZA [auth C]
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
X9W (Subject of Investigation/LOI)
Query on X9W

Download Ideal Coordinates CCD File 
AA [auth I]
AB [auth F]
EB [auth A]
FA [auth D]
JA [auth G]
AA [auth I],
AB [auth F],
EB [auth A],
FA [auth D],
JA [auth G],
MA [auth J],
OA [auth E],
P [auth B],
S [auth H],
U [auth H],
VA [auth L],
WA [auth C]
(2R)-(dimethylphosphoryl)(hydroxy)acetic acid
C4 H9 O4 P
UTDPHALOLFEIHB-SCSAIBSYSA-N
MG
Query on MG

Download Ideal Coordinates CCD File 
BB [auth F]
CA [auth D]
CB [auth F]
DA [auth D]
FB [auth A]
BB [auth F],
CA [auth D],
CB [auth F],
DA [auth D],
FB [auth A],
GA [auth G],
GB [auth A],
HA [auth G],
KA [auth J],
LA [auth J],
M [auth B],
N [auth B],
PA [auth E],
Q [auth H],
QA [auth E],
R [auth H],
SA [auth L],
TA [auth L],
V [auth K],
W [auth K],
XA [auth C],
Y [auth I],
YA [auth C],
Z [auth I]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.78 Å
  • R-Value Free: 0.298 
  • R-Value Work: 0.264 
  • R-Value Observed: 0.265 
  • Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 111.947α = 110.91
b = 111.954β = 107.73
c = 111.944γ = 109.76
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XDSdata scaling
PHENIXphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Australian Research Council (ARC)AustraliaDP210101802

Revision History  (Full details and data files)

  • Version 1.0: 2024-04-24
    Type: Initial release