8UNG

Solution structure of toxin, U-RDTX-Pp19, from assassin bug Pristhesancus plagipennis


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 30 
  • Conformers Submitted: 20 
  • Selection Criteria: Stereochemical properties 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structure and bioactivity of an insecticidal trans-defensin from assassin bug venom.

Walker, A.A.Chin, Y.K.Guo, S.Jin, J.Wilbrink, E.Goudarzi, M.H.Wirth, H.Gordon, E.Weirauch, C.King, G.F.

(2024) Structure 32: 1348-1357.e4

  • DOI: https://doi.org/10.1016/j.str.2024.05.016
  • Primary Citation of Related Structures:  
    8UNG

  • PubMed Abstract: 

    Disulfide-rich peptides such as defensins play diverse roles in immunity and ion channel modulation, as well as constituting the bioactive components of many animal venoms. We investigated the structure and bioactivity of U-RDTX-Pp19, a peptide previously discovered in venom of the assassin bug Pristhesancus plagipennis. Recombinant Pp19 (rPp19) was found to possess insecticidal activity when injected into Drosophila melanogaster. A bioinformatic search revealed that domains homologous to Pp19 are produced by assassin bugs and diverse other arthropods. rPp19 co-eluted with native Pp19 isolated from P. plagipennis, which we found is more abundant in hemolymph than venom. We solved the three-dimensional structure of rPp19 using 2D 1 H NMR spectroscopy, finding that it adopts a disulfide-stabilized structure highly similar to known trans-defensins, with the same cystine connectivity as human α-defensin (I-VI, II-IV, and III-V). The structure of Pp19 is unique among reported structures of arthropod peptides.


  • Organizational Affiliation

    Institute for Molecular Bioscience, The University of Queensland, St Lucia, QLD 4072, Australia; Centre of Excellence for Innovations in Protein and Peptide Science, St Lucia, QLD 4072, Australia. Electronic address: a.walker@imb.uq.edu.au.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Venom peptide Pp19a41Pristhesancus plagipennisMutation(s): 0 
UniProt
Find proteins for A0A2K8JW87 (Pristhesancus plagipennis)
Explore A0A2K8JW87 
Go to UniProtKB:  A0A2K8JW87
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K8JW87
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 30 
  • Conformers Submitted: 20 
  • Selection Criteria: Stereochemical properties 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Australian Research Council (ARC)Australia--

Revision History  (Full details and data files)

  • Version 1.0: 2024-05-29
    Type: Initial release
  • Version 1.1: 2024-07-03
    Changes: Database references
  • Version 1.2: 2024-09-18
    Changes: Database references