8UJW | pdb_00008ujw

Crystal structure of the KETc7 antigen from Taenia solium

PDB DOI: https://doi.org/10.2210/pdb8UJW/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Taenia solium
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2023-10-11 Released: 2023-11-01
Deposition Author(s): Sotelo-Mundo, R.R., Gomez-Yanes, A.C., Lopez-Zavala, A.A., Ochoa-Leyva, A.
Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS), Department of Energy (DOE, United States)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.72 Å
R-Value Free:
0.229 (Depositor), 0.229 (DCC)
R-Value Work:
0.198 (Depositor), 0.198 (DCC)
R-Value Observed:
0.201 (Depositor)

Starting Model: in silico
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This is version 1.0 of the entry. See complete history.

Literature

Crystal structure of the KETc7 antigen from Taenia solium

Sotelo-Mundo, R., Gomez-Yanes, A.C., Lopez-Zavala, A.A., Ochoa-Leyva, A.

To be published.

Macromolecule Content

Total Structure Weight: 28.46 kDa
Atom Count: 1,507
Modeled Residue Count: 182
Deposited Residue Count: 264
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
GRAM domain-containing protein	A	264	Taenia solium	Mutation(s): 0 Gene Names: TASK_LOCUS7246
UniProt
Find proteins for A0A0R3W9T8 (Taenia asiatica) Explore A0A0R3W9T8 Go to UniProtKB: A0A0R3W9T8
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A0R3W9T8
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.72 Å
R-Value Free: 0.229 (Depositor), 0.229 (DCC)
R-Value Work: 0.198 (Depositor), 0.198 (DCC)
R-Value Observed: 0.201 (Depositor)

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 124.134	α = 90
b = 36.613	β = 103.27
c = 41.472	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
SCALA	data scaling
PHENIX	phasing

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2023-11-01

Deposition Author(s):

Sotelo-Mundo, R.R.

Gomez-Yanes, A.C.

Lopez-Zavala, A.A.

Ochoa-Leyva, A.

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	P41GM103393
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	P41GM111244
Department of Energy (DOE, United States)	United States	DE-AC02-76SF00515

Revision History (Full details and data files)

Version 1.0: 2023-11-01
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.