Structure of Mango III variant aptamer bound to T01-07M-B
Passalacqua, L.F.M., Ferre-D'Amare, A.R.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Length | Organism | Image | |
Mango III variant | 36 | synthetic construct | ![]() | ||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
W6F (Subject of Investigation/LOI) Query on W6F | E [auth A] | 2-[(E)-(1,7-dimethylquinolin-4(1H)-ylidene)methyl]-3-{2,16-dioxo-20-[(3aR,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-6,9,12-trioxa-3,15-diazaicosan-1-yl}-1,3-benzothiazol-3-ium C39 H51 N6 O6 S2 OPDJCBUXWAHTAM-PJXAABHXSA-O | |||
DMS Query on DMS | C [auth A], D [auth A] | DIMETHYL SULFOXIDE C2 H6 O S IAZDPXIOMUYVGZ-UHFFFAOYSA-N | |||
K Query on K | B [auth A] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 55.66 | α = 90 |
b = 55.66 | β = 90 |
c = 65.715 | γ = 120 |
Software Name | Purpose |
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PHENIX | refinement |
PHASER | phasing |
DIALS | data reduction |
DIALS | data scaling |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI) | United States | -- |