Crystal structure of the methyltransferase domain of R882H/N879A DNMT3A homotetramer
Lu, J.W., Song, J.K.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA (cytosine-5)-methyltransferase 3A | 287 | Homo sapiens | Mutation(s): 2  Gene Names: DNMT3A EC: 2.1.1.37 (PDB Primary Data), 2.1.1 (PDB Primary Data) | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9Y6K1 (Homo sapiens) Explore Q9Y6K1  Go to UniProtKB:  Q9Y6K1 | |||||
PHAROS:  Q9Y6K1 GTEx:  ENSG00000119772  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9Y6K1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SAH (Subject of Investigation/LOI) Query on SAH | I [auth A], O [auth B], U [auth C], X [auth D] | S-ADENOSYL-L-HOMOCYSTEINE C14 H20 N6 O5 S ZJUKTBDSGOFHSH-WFMPWKQPSA-N | |||
GOL (Subject of Investigation/LOI) Query on GOL | AA [auth D] BA [auth D] J [auth A] K [auth A] L [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 178.068 | α = 90 |
b = 178.068 | β = 90 |
c = 109.909 | γ = 120 |
Software Name | Purpose |
---|---|
HKL-2000 | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
HKL-3000 | data reduction |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Cancer Institute (NIH/NCI) | United States | -- |