Product analogue binding identifies the copper active site of particulate methane monooyxgenase
Tucci, F.J., Jodts, R.J., Hoffman, B.M., Rosenzweig, A.C.(2023) Nat Catal 
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
(2023) Nat Catal 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Particulate methane monooxygenase alpha subunit | A, D [auth E], E [auth I] | 414 | Methylococcus capsulatus str. Bath | Mutation(s): 0  EC: 1.14.18.3 Membrane Entity: Yes  | ![]() |
UniProt | |||||
Find proteins for G1UBD1 (Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)) Explore G1UBD1  Go to UniProtKB:  G1UBD1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | G1UBD1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Particulate methane monooxygenase beta subunit | B, F [auth J], G [auth F] | 247 | Methylococcus capsulatus str. Bath | Mutation(s): 0  EC: 1.14.18.3 Membrane Entity: Yes  | ![]() |
UniProt | |||||
Find proteins for Q607G3 (Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)) Explore Q607G3  Go to UniProtKB:  Q607G3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q607G3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ammonia monooxygenase/methane monooxygenase, subunit C family protein | C, H [auth G], I [auth K] | 260 | Methylococcus capsulatus str. Bath | Mutation(s): 0  EC: 1.14.13.25 Membrane Entity: Yes  | ![]() |
UniProt | |||||
Find proteins for Q603F1 (Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)) Explore Q603F1  Go to UniProtKB:  Q603F1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q603F1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 6 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PLC Query on PLC | AA [auth C] AB [auth G] DA [auth C] DB [auth G] GB [auth G] | DIUNDECYL PHOSPHATIDYL CHOLINE C32 H65 N O8 P IJFVSSZAOYLHEE-SSEXGKCCSA-O | |||
P1O Query on P1O | BA [auth C] CA [auth C] KA [auth J] KB [auth G] LB [auth G] | 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE C28 H57 N O8 P MLKLDGSYMHFAOC-AREMUKBSSA-O | |||
HXG Query on HXG | EB [auth G] IB [auth G] PB [auth K] TB [auth K] W [auth C] | 1,2-dihexanoyl-sn-glycero-3-phosphocholine C20 H41 N O8 P DVZARZBAWHITHR-GOSISDBHSA-O | |||
D10 Query on D10 | FB [auth G] GA [auth E] JA [auth I] L [auth A] LA [auth J] | DECANE C10 H22 DIOQZVSQGTUSAI-UHFFFAOYSA-N | |||
CU (Subject of Investigation/LOI) Query on CU | CB [auth G] EA [auth E] FA [auth E] HA [auth I] IA [auth I] | COPPER (II) ION Cu JPVYNHNXODAKFH-UHFFFAOYSA-N | |||
CL Query on CL | BB [auth G], MB [auth K], T [auth C] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R35GM118035 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R01GM111097 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | T32GM105538 |
National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS) | United States | F31ES034283 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | T32GM008382 |
National Science Foundation (NSF, United States) | United States | MCB-1908587 |