8S8O

Solution Structure of cAMP-dependent Protein Kinase RII-alpha Subunit Dimerization and Docking Domain Complex with Microtubule Associated Protein 2c (84-111)


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report


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Literature

Structural basis of binding the unique N-terminal domain of microtubule-associated protein 2c to proteins regulating kinases of signaling pathways.

Bartosik, V.Plucarova, J.Lanikova, A.Janackova, Z.Padrta, P.Jansen, S.Varecka, V.Gruber, T.Feller, S.M.Zidek, L.

(2024) J Biol Chem 300: 107551-107551

  • DOI: https://doi.org/10.1016/j.jbc.2024.107551
  • Primary Citation of Related Structures:  
    8S8O

  • PubMed Abstract: 

    Isoforms of microtubule-associated protein 2 (MAP2) differ from their homolog Tau in the sequence and interactions of the N-terminal region. Binding of the N-terminal region of MAP2c (N-MAP2c) to the dimerization/docking domains of the regulatory subunit RIIα of cAMP-dependent protein kinase (RIIDD 2 ) and to the Src-homology domain 2 (SH2) of growth factor receptor-bound protein 2 (Grb2) have been described long time ago. However, the structural features of the complexes remained unknown due to the disordered nature of MAP2. Here, we provide structural description of the complexes. We have solved solution structure of N-MAP2c in complex with RIIDD 2 , confirming formation of an amphiphilic α-helix of MAP2c upon binding, defining orientation of the α-helix in the complex and showing that its binding register differs from previous predictions. Using chemical shift mapping, we characterized the binding interface of SH2-Grb2 and rat MAP2c phosphorylated by the tyrosine kinase Fyn in their complex and proposed a model explaining differences between SH2-Grb2 complexes with rat MAP2c and phosphopeptides with a Grb2-specific sequence. The results provide the structural basis of a potential role of MAP2 in regulating cAMP-dependent phosphorylation cascade via interactions with RIIDD 2 and Ras signaling pathway via interactions with SH2-Grb2.


  • Organizational Affiliation

    National Centre for Biomolecular Research, Faculty of Science, Masaryk University, Brno, Czech Republic.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
cAMP-dependent protein kinase type II-alpha regulatory subunit
A, B
52Homo sapiensMutation(s): 0 
Gene Names: PRKAR2APKR2PRKAR2
UniProt & NIH Common Fund Data Resources
Find proteins for P13861 (Homo sapiens)
Explore P13861 
Go to UniProtKB:  P13861
PHAROS:  P13861
GTEx:  ENSG00000114302 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP13861
Sequence Annotations
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Isoform 3 of Microtubule-associated protein 228Rattus norvegicusMutation(s): 0 
Gene Names: Map2Mtap2
UniProt
Find proteins for P15146 (Rattus norvegicus)
Explore P15146 
Go to UniProtKB:  P15146
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP15146
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Czech Science FoundationCzech Republic20-12669S

Revision History  (Full details and data files)

  • Version 1.0: 2024-09-25
    Type: Initial release