8RUY

Structure of IFTA and IFTB in Retrograde Intraflagellar transport trains

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 15.4 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SUBTOMOGRAM AVERAGING 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history. 


Literature

Retrograde intraflagellar transport trains are a unique polymeric arrangement of IFT complexes

Lacey, S.E., Graziadei, A., Pigino, G.

To be published.

Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport protein 1441,367Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport particle protein 1401,409Chlamydomonas reinhardtiiMutation(s): 0 
UniProt
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Osm-6-like proteinC [auth H],
N [auth h]		454Chlamydomonas reinhardtiiMutation(s): 0 
UniProt
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport protein 80D [auth J],
P [auth j]		765Chlamydomonas reinhardtiiMutation(s): 0 
UniProt
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
IFT54E [auth K],
Q [auth k]		510Chlamydomonas reinhardtiiMutation(s): 0 
UniProt
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport particle protein IFT20F [auth L],
R [auth l]		135Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Clusterin-associated protein 1G [auth N],
S [auth n]		443Chlamydomonas reinhardtiiMutation(s): 0 
UniProt
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport protein 74H [auth O]641Chlamydomonas reinhardtiiMutation(s): 0 
UniProt
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport protein 81I [auth P]683Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport protein 27J [auth Q]204Chlamydomonas reinhardtiiMutation(s): 0 
UniProt
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport protein 25K [auth R]189Chlamydomonas reinhardtiiMutation(s): 0 
UniProt
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport protein 46L [auth S],
T [auth s]		344Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport protein 22M [auth T]192Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport protein 172O [auth i],
Z [auth I]		1,755Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport protein 122 homologU [auth C]1,239Chlamydomonas reinhardtiiMutation(s): 0 
UniProt
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport protein 121V [auth D]1,224Chlamydomonas reinhardtiiMutation(s): 0 
UniProt
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport protein 139W [auth E]1,355Chlamydomonas reinhardtiiMutation(s): 1 
UniProt
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
IFT88BA [auth f],
X [auth F]		782Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
IFT70CA [auth g],
Y [auth G]		647Chlamydomonas reinhardtiiMutation(s): 0 
UniProt
Find proteins for A8ITN7 (Chlamydomonas reinhardtii)
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
Intraflagellar transport protein 57AA [auth M],
DA [auth m]		469Chlamydomonas reinhardtiiMutation(s): 0 
UniProt
Find proteins for Q2XQY7 (Chlamydomonas reinhardtii)
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UniProt GroupQ2XQY7
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 15.4 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SUBTOMOGRAM AVERAGING 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION3.1.3

Structure Validation

View Full Validation Report



View more in-depth experimental data
Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
European Research Council (ERC)European Union--
Other government--

Revision History  (Full details and data files)

  • Version 1.0: 2024-07-24
    Type: Initial release