Cryo-EM structure of 1-deoxy-D-xylulose 5-phosphate synthase (DXPS) from Plasmodium falciparum
Gawriljuk, V.O., Godoy, A.S., Oerlemans, R., Groves, M.R.To be published.
Experimental Data Snapshot
Starting Model: in silico
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
1-deoxy-D-xylulose-5-phosphate synthase | 916 | Plasmodium falciparum | Mutation(s): 0  Gene Names: dxs | ||
UniProt | |||||
Find proteins for Q8IDW0 (Plasmodium falciparum (isolate 3D7)) Explore Q8IDW0  Go to UniProtKB:  Q8IDW0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8IDW0 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TPP (Subject of Investigation/LOI) Query on TPP | D [auth A], F [auth B] | THIAMINE DIPHOSPHATE C12 H19 N4 O7 P2 S AYEKOFBPNLCAJY-UHFFFAOYSA-O | |||
MG Query on MG | C [auth A], E [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Task | Software Package | Version |
---|---|---|
RECONSTRUCTION | Coot | 0.9.6 |
RECONSTRUCTION | PHENIX | 1.20.1-4487 |
MODEL REFINEMENT | PHENIX | 1.20.1-4487 |
Funding Organization | Location | Grant Number |
---|---|---|
H2020 Marie Curie Actions of the European Commission | European Union | 860816 |
Medical Research Council (MRC, United Kingdom) | United Kingdom | 218785/Z/19/Z |