8Q5I | pdb_00008q5i

Structure of Candida albicans 80S ribosome in complex with cephaeline


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.45 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

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This is version 1.3 of the entry. See complete history

Literature

Structural characterization of cephaeline binding to the eukaryotic ribosome using Cryo-Electron Microscopy

Kolosova, O.Zgadzay, Y.Stetsenko, A.Atamas, A.Wu, C.Jenner, L.Sachs, S.M.Guskov, A.Yusupov, M.

(2023) Biopolym Cell 

Macromolecule Content 

  • Total Structure Weight: 3,022.58 kDa 
  • Atom Count: 189,590 
  • Modeled Residue Count: 15,302 
  • Deposited Residue Count: 16,557 
  • Unique protein chains: 70
  • Unique nucleic acid chains: 6

Macromolecules


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Entity ID: 5
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L2-BE [auth j]254Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6F1X9 (Candida albicans)
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Entity ID: 6
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L3F [auth k]389Candida albicansMutation(s): 0 
UniProt
Find proteins for Q59LS1 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 7
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L4-BG [auth l]363Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6F4H4 (Candida albicans)
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Entity ID: 8
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L5H [auth m]298Candida albicansMutation(s): 0 
UniProt
Find proteins for Q5AGZ7 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 9
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L6I [auth n]176Candida albicansMutation(s): 0 
UniProt
Find proteins for Q9P834 (Candida albicans)
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Entity ID: 10
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L7-AJ [auth o]241Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6BVN2 (Candida albicans)
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Entity ID: 11
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L8K [auth p]262Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6C337 (Candida albicans)
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Entity ID: 12
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L9-BL [auth q]191Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6C3N3 (Candida albicans)
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Entity ID: 13
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L10M [auth r]220Candida albicansMutation(s): 0 
UniProt
Find proteins for Q5AIB8 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 14
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L11-BN [auth s]174Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6F1S5 (Candida albicans)
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Entity ID: 15
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L13O [auth t]202Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6F5V7 (Candida albicans)
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Entity ID: 16
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L14-BP [auth u]131Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6F332 (Candida albicans)
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Entity ID: 17
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L15-AQ [auth v]204Candida albicansMutation(s): 0 
UniProt
Find proteins for Q5A6R1 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 18
MoleculeChains  Sequence LengthOrganismDetailsImage
Ribosomal protein L13R [auth w]200Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6BZ56 (Candida albicans)
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Entity ID: 19
MoleculeChains  Sequence LengthOrganismDetailsImage
Ribosomal protein L22S [auth x]185Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6BUG0 (Candida albicans)
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Entity ID: 20
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L18-AT [auth y]186Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6C4Y1 (Candida albicans)
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Entity ID: 21
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L19-AU [auth z]190Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A1D8PK40 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 22
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L20V [auth 0]172Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6BZJ3 (Candida albicans)
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Entity ID: 23
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L21-AW [auth 2]160Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6F1C8 (Candida albicans)
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Entity ID: 24
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L22-BX [auth 5]124Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A1D8PM41 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 25
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L23-AY [auth 6]137Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6C444 (Candida albicans)
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Entity ID: 26
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L24-AZ [auth 7]155Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6C4U1 (Candida albicans)
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Entity ID: 27
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L25AA [auth 8]142Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6F6A1 (Candida albicans)
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Entity ID: 28
MoleculeChains  Sequence LengthOrganismDetailsImage
Ribosomal protein L24BA [auth 9]127Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6F3X2 (Candida albicans)
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Entity ID: 29
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L27CA [auth AA]136Candida albicansMutation(s): 0 
UniProt
Find proteins for Q9P843 (Candida albicans)
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Entity ID: 30
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L28DA [auth AB]149Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6BVY8 (Candida albicans)
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Entity ID: 31
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L29EA [auth AC]63Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6F0G8 (Candida albicans)
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Entity ID: 32
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L30FA [auth AD]106Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A1D8PM75 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 33
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L31-BGA [auth AE]112Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6F1M1 (Candida albicans)
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Entity ID: 34
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L32HA [auth AF]131Candida albicansMutation(s): 0 
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Find proteins for O94008 (Candida albicans)
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Entity ID: 35
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L33-AIA [auth AG]107Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6BW57 (Candida albicans)
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Entity ID: 36
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L34-BJA [auth AH]122Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6F171 (Candida albicans)
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Entity ID: 37
MoleculeChains  Sequence LengthOrganismDetailsImage
Ribosomal protein L29KA [auth AI]120Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6F6B7 (Candida albicans)
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Entity ID: 38
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L36LA [auth AJ]99Candida albicansMutation(s): 0 
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Find proteins for P47834 (Candida albicans)
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Entity ID: 39
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L37-BMA [auth AK]90Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A1D8PF45 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 40
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L38NA [auth AL]78Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A1D8PG16 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 41
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L39OA [auth AM]51Candida albicansMutation(s): 0 
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Find proteins for Q96W55 (Candida albicans)
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Entity ID: 42
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L40-BPA [auth AN]52Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A1D8PL68 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 43
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L41QA [auth AO]25Candida albicansMutation(s): 0 
UniProt
Find proteins for P9WER7 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 44
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L42-BRA [auth AP]106Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6BR69 (Candida albicans)
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Entity ID: 45
MoleculeChains  Sequence LengthOrganismDetailsImage
60S ribosomal protein L43-ASA [auth AQ]92Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A1D8PP14 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 47
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S0UA [auth B]261Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6C395 (Candida albicans)
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Entity ID: 48
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S1VA [auth C]256Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6C387 (Candida albicans)
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Entity ID: 49
MoleculeChains  Sequence LengthOrganismDetailsImage
Ribosomal protein S5WA [auth D]249Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6BZ90 (Candida albicans)
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Entity ID: 50
MoleculeChains  Sequence LengthOrganismDetailsImage
Ribosomal protein S3XA [auth E]251Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6BYS1 (Candida albicans)
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Entity ID: 51
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S4YA [auth F]262Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A1D8PCI6 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 52
MoleculeChains  Sequence LengthOrganismDetailsImage
Ribosomal protein S7ZA [auth G]225Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6BS29 (Candida albicans)
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UniProt GroupA0A8H6BS29
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Entity ID: 53
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S6AB [auth H]236Candida albicansMutation(s): 0 
UniProt
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Entity ID: 54
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S7BB [auth I]186Candida albicansMutation(s): 0 
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Entity ID: 55
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S8CB [auth J]206Candida albicansMutation(s): 0 
UniProt
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Entity ID: 56
MoleculeChains  Sequence LengthOrganismDetailsImage
Ribosomal protein S4DB [auth K]189Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6F1X2 (Candida albicans)
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Entity ID: 57
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S10-AEB [auth L]118Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6BWQ8 (Candida albicans)
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Entity ID: 58
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S11AFB [auth M]155Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A1D8PN83 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 59
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S13GB [auth O]151Candida albicansMutation(s): 0 
UniProt
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Entity ID: 60
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S14-AHB [auth P]132Candida albicansMutation(s): 0 
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Entity ID: 61
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S15IB [auth Q]142Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A1D8PK22 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 62
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S16JB [auth R]142Candida albicansMutation(s): 0 
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UniProt GroupO94017
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Entity ID: 63
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S17-BKB [auth S]137Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6BTR7 (Candida albicans)
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Entity ID: 64
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S18-BLB [auth T]145Candida albicansMutation(s): 0 
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Entity ID: 65
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S19-AMB [auth U]145Candida albicansMutation(s): 0 
UniProt
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Entity ID: 66
MoleculeChains  Sequence LengthOrganismDetailsImage
Ribosomal protein S10NB [auth V]119Candida albicansMutation(s): 0 
UniProt
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Entity ID: 67
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S21OB [auth W]87Candida albicansMutation(s): 0 
UniProt
Find proteins for Q9P844 (Candida albicans)
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Entity ID: 68
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S22-APB [auth X]130Candida albicansMutation(s): 0 
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Entity ID: 69
MoleculeChains  Sequence LengthOrganismDetailsImage
Ribosomal protein S23 (S12)QB [auth Y]145Candida albicansMutation(s): 0 
UniProt
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Entity ID: 70
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S24RB [auth Z]135Candida albicansMutation(s): 0 
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Find proteins for A0A8H6C3K1 (Candida albicans)
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Entity ID: 71
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S26SB [auth b]119Candida albicansMutation(s): 0 
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Find proteins for A0A8H6BTS1 (Candida albicans)
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Entity ID: 72
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S27TB [auth c]82Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A8H6BWE6 (Candida albicans)
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Entity ID: 73
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S28-BUB [auth d]67Candida albicansMutation(s): 0 
UniProt
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Entity ID: 74
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S29AVB [auth e]56Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A1D8PTR4 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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Entity ID: 75
MoleculeChains  Sequence LengthOrganismDetailsImage
40S ribosomal protein S30WB [auth f]63Candida albicansMutation(s): 0 
UniProt
Find proteins for A0A1D8PSK2 (Candida albicans (strain SC5314 / ATCC MYA-2876))
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UniProt GroupA0A1D8PSK2
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Entity ID: 1
MoleculeChains LengthOrganismImage
25S rRNAA [auth 1]3,359Candida albicans
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Entity ID: 2
MoleculeChains LengthOrganismImage
5SB [auth 3]121Candida albicans
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Entity ID: 3
MoleculeChains LengthOrganismImage
5.8S rRNAC [auth 4]158Candida albicans
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Entity ID: 4
MoleculeChains LengthOrganismImage
Mixture of endogenous E-tRNAsD [auth 10]14Candida albicans
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Entity ID: 46
MoleculeChains LengthOrganismImage
18S ribosomal RNATA [auth A]1,787Candida albicans
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Entity ID: 76
MoleculeChains LengthOrganismImage
DNA (5'-R(P*GP*GP*CP*AP*G)-3')XB [auth g]5synthetic construct
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Reference Sequence

Small Molecules

Ligands 5 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
K16
(Subject of Investigation/LOI)

Query on K16



Download:Ideal Coordinates CCD File
AC [auth 1],
NM [auth A],
ZB [auth 1]
Cephaeline
C28 H38 N2 O4
DTGZHCFJNDAHEN-OZEXIGSWSA-N
SPK

Query on SPK



Download:Ideal Coordinates CCD File
YB [auth 1]SPERMINE (FULLY PROTONATED FORM)
C10 H30 N4
PFNFFQXMRSDOHW-UHFFFAOYSA-R
SPD

Query on SPD



Download:Ideal Coordinates CCD File
BC [auth 1]SPERMIDINE
C7 H19 N3
ATHGHQPFGPMSJY-UHFFFAOYSA-N
ZN

Query on ZN



Download:Ideal Coordinates CCD File
IM [auth AK]
JM [auth AN]
KM [auth AP]
KQ [auth b]
LQ [auth c]
IM [auth AK],
JM [auth AN],
KM [auth AP],
KQ [auth b],
LQ [auth c],
MM [auth AQ],
MQ [auth e]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG

Query on MG



Download:Ideal Coordinates CCD File
AD [auth 1]
AE [auth 1]
AF [auth 1]
AG [auth 1]
AH [auth 1]
AD [auth 1],
AE [auth 1],
AF [auth 1],
AG [auth 1],
AH [auth 1],
AI [auth 1],
AJ [auth 1],
AK [auth 1],
AL [auth 1],
AM [auth j],
AN [auth A],
AO [auth A],
AP [auth A],
AQ [auth A],
BD [auth 1],
BE [auth 1],
BF [auth 1],
BG [auth 1],
BH [auth 1],
BI [auth 1],
BJ [auth 1],
BK [auth 1],
BL [auth 1],
BM [auth k],
BN [auth A],
BO [auth A],
BP [auth A],
BQ [auth A],
CC [auth 1],
CD [auth 1],
CE [auth 1],
CF [auth 1],
CG [auth 1],
CH [auth 1],
CI [auth 1],
CJ [auth 1],
CK [auth 1],
CL [auth 1],
CM [auth o],
CN [auth A],
CO [auth A],
CP [auth A],
CQ [auth A],
DC [auth 1],
DD [auth 1],
DE [auth 1],
DF [auth 1],
DG [auth 1],
DH [auth 1],
DI [auth 1],
DJ [auth 1],
DK [auth 1],
DL [auth 1],
DM [auth r],
DN [auth A],
DO [auth A],
DP [auth A],
DQ [auth A],
EC [auth 1],
ED [auth 1],
EE [auth 1],
EF [auth 1],
EG [auth 1],
EH [auth 1],
EI [auth 1],
EJ [auth 1],
EK [auth 1],
EL [auth 1],
EM [auth v],
EN [auth A],
EO [auth A],
EP [auth A],
EQ [auth A],
FC [auth 1],
FD [auth 1],
FE [auth 1],
FF [auth 1],
FG [auth 1],
FH [auth 1],
FI [auth 1],
FJ [auth 1],
FK [auth 1],
FL [auth 1],
FM [auth x],
FN [auth A],
FO [auth A],
FP [auth A],
FQ [auth A],
GC [auth 1],
GD [auth 1],
GE [auth 1],
GF [auth 1],
GG [auth 1],
GH [auth 1],
GI [auth 1],
GJ [auth 1],
GK [auth 1],
GL [auth 1],
GM [auth 6],
GN [auth A],
GO [auth A],
GP [auth A],
GQ [auth A],
HC [auth 1],
HD [auth 1],
HE [auth 1],
HF [auth 1],
HG [auth 1],
HH [auth 1],
HI [auth 1],
HJ [auth 1],
HK [auth 1],
HL [auth 1],
HM [auth AH],
HN [auth A],
HO [auth A],
HP [auth A],
HQ [auth C],
IC [auth 1],
ID [auth 1],
IE [auth 1],
IF [auth 1],
IG [auth 1],
IH [auth 1],
II [auth 1],
IJ [auth 1],
IK [auth 1],
IL [auth 1],
IN [auth A],
IO [auth A],
IP [auth A],
IQ [auth X],
JC [auth 1],
JD [auth 1],
JE [auth 1],
JF [auth 1],
JG [auth 1],
JH [auth 1],
JI [auth 1],
JJ [auth 1],
JK [auth 1],
JL [auth 1],
JN [auth A],
JO [auth A],
JP [auth A],
JQ [auth Y],
KC [auth 1],
KD [auth 1],
KE [auth 1],
KF [auth 1],
KG [auth 1],
KH [auth 1],
KI [auth 1],
KJ [auth 1],
KK [auth 1],
KL [auth 1],
KN [auth A],
KO [auth A],
KP [auth A],
LC [auth 1],
LD [auth 1],
LE [auth 1],
LF [auth 1],
LG [auth 1],
LH [auth 1],
LI [auth 1],
LJ [auth 1],
LK [auth 1],
LL [auth 1],
LM [auth AP],
LN [auth A],
LO [auth A],
LP [auth A],
MC [auth 1],
MD [auth 1],
ME [auth 1],
MF [auth 1],
MG [auth 1],
MH [auth 1],
MI [auth 1],
MJ [auth 1],
MK [auth 1],
ML [auth 1],
MN [auth A],
MO [auth A],
MP [auth A],
NC [auth 1],
ND [auth 1],
NE [auth 1],
NF [auth 1],
NG [auth 1],
NH [auth 1],
NI [auth 1],
NJ [auth 1],
NK [auth 1],
NL [auth 1],
NN [auth A],
NO [auth A],
NP [auth A],
OC [auth 1],
OD [auth 1],
OE [auth 1],
OF [auth 1],
OG [auth 1],
OH [auth 1],
OI [auth 1],
OJ [auth 1],
OK [auth 1],
OL [auth 1],
OM [auth A],
ON [auth A],
OO [auth A],
OP [auth A],
PC [auth 1],
PD [auth 1],
PE [auth 1],
PF [auth 1],
PG [auth 1],
PH [auth 1],
PI [auth 1],
PJ [auth 1],
PK [auth 1],
PL [auth 1],
PM [auth A],
PN [auth A],
PO [auth A],
PP [auth A],
QC [auth 1],
QD [auth 1],
QE [auth 1],
QF [auth 1],
QG [auth 1],
QH [auth 1],
QI [auth 1],
QJ [auth 1],
QK [auth 1],
QL [auth 1],
QM [auth A],
QN [auth A],
QO [auth A],
QP [auth A],
RC [auth 1],
RD [auth 1],
RE [auth 1],
RF [auth 1],
RG [auth 1],
RH [auth 1],
RI [auth 1],
RJ [auth 1],
RK [auth 1],
RL [auth 1],
RM [auth A],
RN [auth A],
RO [auth A],
RP [auth A],
SC [auth 1],
SD [auth 1],
SE [auth 1],
SF [auth 1],
SG [auth 1],
SH [auth 1],
SI [auth 1],
SJ [auth 1],
SK [auth 1],
SL [auth 1],
SM [auth A],
SN [auth A],
SO [auth A],
SP [auth A],
TC [auth 1],
TD [auth 1],
TE [auth 1],
TF [auth 1],
TG [auth 1],
TH [auth 1],
TI [auth 1],
TJ [auth 1],
TK [auth 1],
TL [auth 1],
TM [auth A],
TN [auth A],
TO [auth A],
TP [auth A],
UC [auth 1],
UD [auth 1],
UE [auth 1],
UF [auth 1],
UG [auth 1],
UH [auth 1],
UI [auth 1],
UJ [auth 1],
UK [auth 1],
UL [auth 1],
UM [auth A],
UN [auth A],
UO [auth A],
UP [auth A],
VC [auth 1],
VD [auth 1],
VE [auth 1],
VF [auth 1],
VG [auth 1],
VH [auth 1],
VI [auth 1],
VJ [auth 1],
VK [auth 1],
VL [auth 1],
VM [auth A],
VN [auth A],
VO [auth A],
VP [auth A],
WC [auth 1],
WD [auth 1],
WE [auth 1],
WF [auth 1],
WG [auth 1],
WH [auth 1],
WI [auth 1],
WJ [auth 1],
WK [auth 1],
WL [auth 1],
WM [auth A],
WN [auth A],
WO [auth A],
WP [auth A],
XC [auth 1],
XD [auth 1],
XE [auth 1],
XF [auth 1],
XG [auth 1],
XH [auth 1],
XI [auth 1],
XJ [auth 1],
XK [auth 1],
XL [auth 3],
XM [auth A],
XN [auth A],
XO [auth A],
XP [auth A],
YC [auth 1],
YD [auth 1],
YE [auth 1],
YF [auth 1],
YG [auth 1],
YH [auth 1],
YI [auth 1],
YJ [auth 1],
YK [auth 1],
YL [auth 4],
YM [auth A],
YN [auth A],
YO [auth A],
YP [auth A],
ZC [auth 1],
ZD [auth 1],
ZE [auth 1],
ZF [auth 1],
ZG [auth 1],
ZH [auth 1],
ZI [auth 1],
ZJ [auth 1],
ZK [auth 1],
ZL [auth 4],
ZM [auth A],
ZN [auth A],
ZO [auth A],
ZP [auth A]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
MLZ
Query on MLZ
Y [auth 6]L-PEPTIDE LINKINGC7 H16 N2 O2LYS

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.45 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.19rc4_4035:

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Fondation pour la Recherche Medicale (FRM)FranceFDT202204014886

Revision History  (Full details and data files)

  • Version 1.0: 2023-09-13
    Type: Initial release
  • Version 1.1: 2023-11-01
    Changes: Derived calculations, Structure summary
  • Version 1.2: 2023-12-20
    Changes: Database references
  • Version 1.3: 2024-01-31
    Changes: Database references