DNA duplex with triplets bases in minor groove
Abdullrahman, A., Cardin, C.J., Hall, J.P.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 1 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*TP*AP*CP*GP*TP*CP*TP*CP*TP*CP*AP*GP*TP*C)-3') | 14 | synthetic construct | |||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*AP*AP*CP*TP*GP*AP*GP*AP*GP*AP*CP*GP*TP*A)-3') | 14 | synthetic construct | |||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
K Query on K | F [auth A], G [auth A] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N | |||
MG (Subject of Investigation/LOI) Query on MG | C [auth A], D [auth A], E [auth A], H [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 39.833 | α = 90 |
b = 39.833 | β = 90 |
c = 58.964 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
CrysalisPro | data reduction |
Aimless | data scaling |
SHELXDE | phasing |
Funding Organization | Location | Grant Number |
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H2020 Marie Curie Actions of the European Commission | European Union | H2020-MSCA-ITN-2019-861381 |