8P8H

Crystal structure of HHD2 domain of hRTEL1

PDB DOI: https://doi.org/10.2210/pdb8P8H/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Homo sapiens
Expression System: Escherichia coli B
Mutation(s): No

Deposited: 2023-06-01 Released: 2024-06-12
Deposition Author(s): Hegde, R.P., Kanade, M., Cortone, G., Graewert, M., Longo, A., Gonzalez, A., Chaves-Arquero, B., Blanco, F.J., Napolitano, L.M.R., Onesti, S.
Funding Organization(s): Other government

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.30 Å
R-Value Free: 0.257
R-Value Work: 0.214

Starting Model: in silico
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wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Crystal structure of HHD2 domain of hRTEL1

Hegde, R.P., Kanade, M., Cortone, G., Graewert, M., Longo, A., Gonzalez, A., Chaves-Arquero, B., Blanco, F.J., Napolitano, L.M.R., Onesti, S.

To be published.

Macromolecule Content

Total Structure Weight: 73.9 kDa
Atom Count: 4,279
Modelled Residue Count: 553
Deposited Residue Count: 679
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Regulator of telomere elongation helicase 1	A, B, C, D, E A, B, C, D, E, F, G	97	Homo sapiens	Mutation(s): 0 Gene Names: RTEL1, C20orf41, KIAA1088, NHL EC: 3.6.4.12
UniProt & NIH Common Fund Data Resources
Find proteins for Q9NZ71 (Homo sapiens) Explore Q9NZ71 Go to UniProtKB: Q9NZ71
PHAROS: Q9NZ71 GTEx: ENSG00000258366
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9NZ71
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.30 Å
R-Value Free: 0.257
R-Value Work: 0.214
Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 65.59	α = 90
b = 60.68	β = 96.13
c = 79.53	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
XDS	data reduction
XDS	data scaling
MOLREP	phasing

Structure Validation

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Entry History & Funding Information

Deposition Data

Released Date: 2024-06-12

Deposition Author(s):

Chaves-Arquero, B.

Napolitano, L.M.R.

Funding Organization	Location	Grant Number
Other government	Italy	IG 20778
Other government	European Union	859853

Revision History (Full details and data files)

Version 1.0: 2024-06-12
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.