The compensatory mechanism of a naturally evolved E167K RF2 counteracting the loss of RF1 in bacteria
Pundir, S., Larsson, D.S.D., Selmer, M., Sanyal, S.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS2 | B [auth g] | 241 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7V0 (Escherichia coli (strain K12)) Explore P0A7V0  Go to UniProtKB:  P0A7V0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7V0 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS3 | C [auth h] | 233 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7V3 (Escherichia coli (strain K12)) Explore P0A7V3  Go to UniProtKB:  P0A7V3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7V3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS4 | D [auth i] | 206 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7V8 (Escherichia coli (strain K12)) Explore P0A7V8  Go to UniProtKB:  P0A7V8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7V8 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 5 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS5 | E [auth j] | 167 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7W1 (Escherichia coli (strain K12)) Explore P0A7W1  Go to UniProtKB:  P0A7W1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7W1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 6 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S6 | F [auth k] | 135 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P02358 (Escherichia coli (strain K12)) Explore P02358  Go to UniProtKB:  P02358 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02358 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 7 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S7 | G [auth l] | 179 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P02359 (Escherichia coli (strain K12)) Explore P02359  Go to UniProtKB:  P02359 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02359 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 8 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS8 | H [auth m] | 130 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7W7 (Escherichia coli (strain K12)) Explore P0A7W7  Go to UniProtKB:  P0A7W7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7W7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 9 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS9 | I [auth n] | 130 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7X3 (Escherichia coli (strain K12)) Explore P0A7X3  Go to UniProtKB:  P0A7X3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7X3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 10 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS10 | J [auth o] | 103 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7R5 (Escherichia coli (strain K12)) Explore P0A7R5  Go to UniProtKB:  P0A7R5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7R5 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 11 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS11 | K [auth p] | 129 | Escherichia coli | Mutation(s): 1  | |
UniProt | |||||
Find proteins for P0A7R9 (Escherichia coli (strain K12)) Explore P0A7R9  Go to UniProtKB:  P0A7R9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7R9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 12 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS12 | L [auth q] | 124 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7S3 (Escherichia coli (strain K12)) Explore P0A7S3  Go to UniProtKB:  P0A7S3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7S3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 13 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS13 | M [auth r] | 118 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7S9 (Escherichia coli (strain K12)) Explore P0A7S9  Go to UniProtKB:  P0A7S9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7S9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 14 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS14 | N [auth s] | 101 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0AG59 (Escherichia coli (strain K12)) Explore P0AG59  Go to UniProtKB:  P0AG59 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AG59 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 15 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS15 | O [auth t] | 89 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0ADZ4 (Escherichia coli (strain K12)) Explore P0ADZ4  Go to UniProtKB:  P0ADZ4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ADZ4 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 16 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein bS16 | P [auth u] | 82 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7T3 (Escherichia coli (strain K12)) Explore P0A7T3  Go to UniProtKB:  P0A7T3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7T3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 17 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS17 | Q [auth v] | 84 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0AG63 (Escherichia coli (strain K12)) Explore P0AG63  Go to UniProtKB:  P0AG63 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AG63 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 18 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein bS18 | R [auth w] | 75 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7T7 (Escherichia coli (strain K12)) Explore P0A7T7  Go to UniProtKB:  P0A7T7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7T7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 19 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS19 | S [auth x] | 92 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7U3 (Escherichia coli (strain K12)) Explore P0A7U3  Go to UniProtKB:  P0A7U3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7U3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 20 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein bS20 | T [auth y] | 87 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7U7 (Escherichia coli (strain K12)) Explore P0A7U7  Go to UniProtKB:  P0A7U7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7U7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 21 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein bS21 | U [auth z] | 71 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P68679 (Escherichia coli (strain K12)) Explore P68679  Go to UniProtKB:  P68679 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P68679 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 26 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L2 | Z [auth B] | 273 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P60422 (Escherichia coli (strain K12)) Explore P60422  Go to UniProtKB:  P60422 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P60422 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 27 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L3 | AA [auth C] | 209 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P60438 (Escherichia coli (strain K12)) Explore P60438  Go to UniProtKB:  P60438 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P60438 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 28 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L4 | BA [auth D] | 201 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P60723 (Escherichia coli (strain K12)) Explore P60723  Go to UniProtKB:  P60723 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P60723 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 29 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L5 | CA [auth E] | 179 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P62399 (Escherichia coli (strain K12)) Explore P62399  Go to UniProtKB:  P62399 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P62399 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 30 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L6 | DA [auth F] | 177 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0AG55 (Escherichia coli (strain K12)) Explore P0AG55  Go to UniProtKB:  P0AG55 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AG55 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 31 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L13 | EA [auth J] | 142 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0AA10 (Escherichia coli (strain K12)) Explore P0AA10  Go to UniProtKB:  P0AA10 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AA10 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 32 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L14 | FA [auth K] | 123 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0ADY3 (Escherichia coli (strain K12)) Explore P0ADY3  Go to UniProtKB:  P0ADY3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ADY3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 33 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L15 | GA [auth L] | 144 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P02413 (Escherichia coli (strain K12)) Explore P02413  Go to UniProtKB:  P02413 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02413 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 34 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein uL16 | HA [auth M] | 136 | Escherichia coli | Mutation(s): 1  | |
UniProt | |||||
Find proteins for P0ADY7 (Escherichia coli (strain K12)) Explore P0ADY7  Go to UniProtKB:  P0ADY7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ADY7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 35 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L17 | IA [auth N] | 127 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0AG44 (Escherichia coli (strain K12)) Explore P0AG44  Go to UniProtKB:  P0AG44 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AG44 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 36 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L18 | JA [auth O] | 117 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0C018 (Escherichia coli (strain K12)) Explore P0C018  Go to UniProtKB:  P0C018 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0C018 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 37 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L19 | KA [auth P] | 115 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7K6 (Escherichia coli (strain K12)) Explore P0A7K6  Go to UniProtKB:  P0A7K6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7K6 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 38 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L20 | LA [auth Q] | 118 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7L3 (Escherichia coli (strain K12)) Explore P0A7L3  Go to UniProtKB:  P0A7L3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7L3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 39 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L21 | MA [auth R] | 103 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0AG48 (Escherichia coli (strain K12)) Explore P0AG48  Go to UniProtKB:  P0AG48 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AG48 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 40 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L22 | NA [auth S] | 110 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P61175 (Escherichia coli (strain K12)) Explore P61175  Go to UniProtKB:  P61175 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P61175 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 41 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L23 | OA [auth T] | 100 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0ADZ0 (Escherichia coli (strain K12)) Explore P0ADZ0  Go to UniProtKB:  P0ADZ0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ADZ0 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 42 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L24 | PA [auth U] | 104 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P60624 (Escherichia coli (strain K12)) Explore P60624  Go to UniProtKB:  P60624 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P60624 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 43 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L25 | QA [auth V] | 94 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P68919 (Escherichia coli (strain K12)) Explore P68919  Go to UniProtKB:  P68919 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P68919 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 44 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L27 | RA [auth W] | 85 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7L8 (Escherichia coli (strain K12)) Explore P0A7L8  Go to UniProtKB:  P0A7L8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7L8 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 45 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L28 | SA [auth X] | 78 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7M2 (Escherichia coli (strain K12)) Explore P0A7M2  Go to UniProtKB:  P0A7M2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7M2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 46 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L29 | TA [auth Y] | 63 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7M6 (Escherichia coli (strain K12)) Explore P0A7M6  Go to UniProtKB:  P0A7M6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7M6 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 47 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L30 | UA [auth Z] | 59 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0AG51 (Escherichia coli (strain K12)) Explore P0AG51  Go to UniProtKB:  P0AG51 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AG51 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 48 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L32 | VA [auth b] | 57 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7N4 (Escherichia coli (strain K12)) Explore P0A7N4  Go to UniProtKB:  P0A7N4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7N4 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 49 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L33 | WA [auth c] | 55 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7N9 (Escherichia coli (strain K12)) Explore P0A7N9  Go to UniProtKB:  P0A7N9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7N9 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 50 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L34 | XA [auth d] | 46 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7P5 (Escherichia coli (strain K12)) Explore P0A7P5  Go to UniProtKB:  P0A7P5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7P5 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 51 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L35 | YA [auth e] | 65 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7Q1 (Escherichia coli (strain K12)) Explore P0A7Q1  Go to UniProtKB:  P0A7Q1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7Q1 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 52 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L36 | ZA [auth f] | 38 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7Q6 (Escherichia coli (strain K12)) Explore P0A7Q6  Go to UniProtKB:  P0A7Q6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7Q6 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 53 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein bL31A | AB [auth a] | 70 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7M9 (Escherichia coli (strain K12)) Explore P0A7M9  Go to UniProtKB:  P0A7M9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7M9 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 54 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L11 | BB [auth I] | 142 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7J7 (Escherichia coli (strain K12)) Explore P0A7J7  Go to UniProtKB:  P0A7J7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7J7 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 55 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Peptide chain release factor RF2 | CB [auth 6] | 365 | Escherichia coli K-12 | Mutation(s): 1  Gene Names: prfB, supK, b2891, JW5847 | |
UniProt | |||||
Find proteins for P07012 (Escherichia coli (strain K12)) Explore P07012  Go to UniProtKB:  P07012 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P07012 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 56 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L9 | DB [auth G] | 149 | Escherichia coli | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A7R1 (Escherichia coli (strain K12)) Explore P0A7R1  Go to UniProtKB:  P0A7R1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7R1 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
16S rRNA | A [auth 2] | 1,542 | Escherichia coli | ||
Sequence AnnotationsExpand | |||||
|
Entity ID: 22 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
mRNA | V [auth 4] | 49 | Escherichia coli | ||
Sequence AnnotationsExpand | |||||
|
Entity ID: 23 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
tRNA(fMet) | W [auth 5] | 76 | Escherichia coli | ||
Sequence AnnotationsExpand | |||||
|
Entity ID: 24 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
23S rRNA | X [auth 1] | 2,904 | Escherichia coli | ||
Sequence AnnotationsExpand | |||||
|
Entity ID: 25 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
5S rRNA | Y [auth 3] | 120 | Escherichia coli | ||
Sequence AnnotationsExpand | |||||
|
Ligands 6 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SPM Query on SPM | SO [auth 1] | SPERMINE C10 H26 N4 PFNFFQXMRSDOHW-UHFFFAOYSA-N | |||
SPD Query on SPD | IO [auth 1] JO [auth 1] KO [auth 1] KT [auth 1] LO [auth 1] | SPERMIDINE C7 H19 N3 ATHGHQPFGPMSJY-UHFFFAOYSA-N | |||
PUT Query on PUT | AT [auth 1] BT [auth 1] CT [auth 1] DT [auth 1] EG [auth 2] | 1,4-DIAMINOBUTANE C4 H12 N2 KIDHWZJUCRJVML-UHFFFAOYSA-N | |||
ZN Query on ZN | VT [auth f], WT [auth a] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
K Query on K | AF [auth 2] AP [auth 1] AQ [auth 1] AR [auth 1] AS [auth 1] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N | |||
MG Query on MG | AC [auth 2] AD [auth 2] AE [auth 2] AG [auth 2] AH [auth 1] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Modified Residues 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
D2T Query on D2T | L [auth q] | L-PEPTIDE LINKING | C5 H9 N O4 S | ASP | |
MEQ Query on MEQ | AA [auth C] | L-PEPTIDE LINKING | C6 H12 N2 O3 | GLN | |
4D4 Query on 4D4 | HA [auth M] | L-PEPTIDE LINKING | C6 H14 N4 O3 | ARG |
Task | Software Package | Version |
---|---|---|
RECONSTRUCTION | cryoSPARC | 4.2 |
MODEL REFINEMENT | PHENIX | 1.20 |
Funding Organization | Location | Grant Number |
---|---|---|
Swedish Research Council | Sweden | 2016-06264 |
Swedish Research Council | Sweden | 2018-05946 |
Swedish Research Council | Sweden | 2018-05498 |
Knut and Alice Wallenberg Foundation | Sweden | KAW 2017.0055 |
Carl Trygger Foundation | Sweden | CTS 18:338 |
Carl Trygger Foundation | Sweden | CTS 19:806 |
Wenner-Gren Foundation | United States | UPD2017:0238 |
Swedish Research Council | Sweden | 2016-06264 |
Swedish Research Council | Sweden | 2017-03827 |