Structure of the Thiobacillus denitrificans cobalamin transporter BtuM in complex with cyanocobalamin
Martinez-Felices, J.M., Slotboom, D.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cobalamin ABC transporter | 199 | Thiobacillus denitrificans | Mutation(s): 0  Gene Names: Tbd_2719 Membrane Entity: Yes  | ![]() | |
UniProt | |||||
Find proteins for Q3SFD8 (Thiobacillus denitrificans (strain ATCC 25259)) Explore Q3SFD8  Go to UniProtKB:  Q3SFD8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q3SFD8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
B12 (Subject of Investigation/LOI) Query on B12 | B [auth A] | COBALAMIN C62 H89 Co N13 O14 P LKVIQTCSMMVGFU-DWSMJLPVSA-N | |||
BNG Query on BNG | C [auth A], D [auth A], E [auth A], F [auth A], G [auth A] | nonyl beta-D-glucopyranoside C15 H30 O6 QFAPUKLCALRPLH-UXXRCYHCSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 95.982 | α = 90 |
b = 95.982 | β = 90 |
c = 77.291 | γ = 120 |
Software Name | Purpose |
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REFMAC | refinement |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Coot | model building |
Funding Organization | Location | Grant Number |
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Other government | Netherlands | -- |