Structure of the tail fibre from an extracellular contractile injection system from Photorhabdus bacteria
Godfrey, A.E., Diaz-Saez, L.To be published.
Experimental Data Snapshot
Starting Model: in silico
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Adenoviral fiber protein | 217 | Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 | Mutation(s): 0  Gene Names: PAU_02236 | ![]() | |
UniProt | |||||
Find proteins for C7BKQ5 (Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)) Explore C7BKQ5  Go to UniProtKB:  C7BKQ5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C7BKQ5 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MPD Query on MPD | AA [auth F] G [auth A] I [auth A] L [auth B] N [auth B] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N | |||
EDO Query on EDO | H [auth A] J [auth A] M [auth B] O [auth B] P [auth C] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
UNX Query on UNX | K [auth B], X [auth F] | UNKNOWN ATOM OR ION X |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 67.458 | α = 90 |
b = 53.536 | β = 95.65 |
c = 220.66 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
Aimless | data scaling |
PHASER | phasing |
xia2 | data reduction |
Funding Organization | Location | Grant Number |
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Medical Research Council (MRC, United Kingdom) | United Kingdom | MRC DTP in IBR |