8K1A

the wild-typed alpha-galactosidase 5

• PDB DOI: https://doi.org/10.2210/pdb8K1A/pdb
• EM Map EMD-36790: EMDB EMDataResource

• Classification: HYDROLASE
• Organism(s): Blautia pseudococcoides
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2023-07-10 Released: 2024-07-17 
• Deposition Author(s): Li, Y.W., Ru, Y.X.
• Funding Organization(s): Other government

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.28 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Activity-Based Meta proteomics Drives Discovery and Enzymological Characterization of Novel alpha-galactosidases in the Gut Microbiome

Li, Y.W., Ru, Y.X.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D2  (Explore in 3D)
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 352.07 kDa 
• Atom Count: 24,001 
• Modelled Residue Count: 2,963 
• Deposited Residue Count: 3,052 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Alpha-galactosidase	A, B, C, D	763	Blautia pseudococcoides	Mutation(s): 0  Gene Names: A4V09_19485
UniProt
Find proteins for A0A1C7IHX3 (Blautia pseudococcoides) Explore A0A1C7IHX3  Go to UniProtKB:  A0A1C7IHX3

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.28 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-07-17 
Deposition Author(s): Li, Y.W., Ru, Y.X.

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Funding Organization	Location	Grant Number
Other government	China	K22227503

Revision History  

• Version 1.0: 2024-07-17
  Type: Initial release