8JPJ

Cryo-EM structure of ClC-6 apo state

• PDB DOI: https://doi.org/10.2210/pdb8JPJ/pdb
• EM Map EMD-36481: EMDB EMDataResource

• Classification: MEMBRANE PROTEIN
• Organism(s): Homo sapiens
• Expression System: Homo sapiens
• Mutation(s): No 
• Membrane Protein: Yes  PDBTMMemProtMD


• Deposited: 2023-06-12 Released: 2023-09-20 
• Deposition Author(s): Zhang, S.S.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.50 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Molecular basis of ClC-6 function and its impairment in human disease

Zhang, S.S.

(2023) Sci Adv 

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 194.91 kDa 
• Atom Count: 11,448 
• Modelled Residue Count: 1,466 
• Deposited Residue Count: 1,738 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
H(+)/Cl(-) exchange transporter 6	A, B	869	Homo sapiens	Mutation(s): 0  Gene Names: CLCN6 Membrane Entity: Yes
UniProt & NIH Common Fund Data Resources
Find proteins for P51797 (Homo sapiens) Explore P51797  Go to UniProtKB:  P51797
PHAROS:  P51797 GTEx:  ENSG00000011021

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
CL	C [auth A], D [auth A], E [auth B], F [auth B]	CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.50 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2023-09-20 
Deposition Author(s): Zhang, S.S.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	32030056

Revision History  

• Version 1.0: 2023-09-20
  Type: Initial release