Cryo-EM structure of GluN1-2A NMDAR in complex with human Fab5F6 in one fab bind conformation
Wang, H.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Glutamate receptor ionotropic, NMDA 2A | 841 | Homo sapiens | Mutation(s): 0  Gene Names: GRIN2A, NMDAR2A Membrane Entity: Yes  | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q12879 (Homo sapiens) Explore Q12879  Go to UniProtKB:  Q12879 | |||||
PHAROS:  Q12879 GTEx:  ENSG00000183454  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q12879 | ||||
Glycosylation | |||||
Glycosylation Sites: 1 | Go to GlyGen: Q12879-1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Glutamate receptor ionotropic, NMDA 1 | 847 | Homo sapiens | Mutation(s): 0  Gene Names: GRIN1, NMDAR1 Membrane Entity: Yes  | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q05586 (Homo sapiens) Explore Q05586  Go to UniProtKB:  Q05586 | |||||
PHAROS:  Q05586 GTEx:  ENSG00000176884  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q05586 | ||||
Glycosylation | |||||
Glycosylation Sites: 4 | Go to GlyGen: Q05586-1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Fab5F6 Heavy Chain | 256 | Homo sapiens | Mutation(s): 0  | ![]() | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Fab5F6 Light Chain | 236 | Homo sapiens | Mutation(s): 0  | ![]() | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG (Subject of Investigation/LOI) Query on NAG | H [auth B] I [auth B] J [auth B] K [auth B] L [auth C] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Task | Software Package | Version |
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RECONSTRUCTION | RELION |
Funding Organization | Location | Grant Number |
---|---|---|
Other government | China | 2022ZD0212700 |
Other government | China | LG 202106-02 |
Other government | China | 2017YFA0505700 |
Other government | China | XDBS01020000 |
Other government | China | 2018SHZDZX05 |