8JIX

Crystal structure of the Bagaza virus helicase and structure-based discovery of a novel inhibitor

• PDB DOI: https://doi.org/10.2210/pdb8JIX/pdb

• Classification: STRUCTURAL PROTEIN
• Organism(s): Bagaza virus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2023-05-29 Released: 2024-03-06 
• Deposition Author(s): Zhao, R., Shu, W., Cao, J.M., Zhou, X., Wang, D.P.
• Funding Organization(s): Other government, National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.71 Å
• R-Value Free: 0.204 
• R-Value Work: 0.182 

Literature

Crystal structure of the Bagaza virus helicase and structure-based discovery of a novel inhibitor

Zhao, R., Shu, W., Cao, J.M., Zhou, X., Wang, D.P.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 49.73 kDa 
• Atom Count: 3,770 
• Modelled Residue Count: 433 
• Deposited Residue Count: 437 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Genome polyprotein	A	437	Bagaza virus	Mutation(s): 0
UniProt
Find proteins for A0A2S0RQK5 (Bagaza virus) Explore A0A2S0RQK5  Go to UniProtKB:  A0A2S0RQK5

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.71 Å
• R-Value Free: 0.204 
• R-Value Work: 0.182 
• Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 56.435	α = 90
b = 71.196	β = 90
c = 115.854	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data scaling
XDS	data reduction
PHENIX	phasing
PDB_EXTRACT	data extraction

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-03-06 
Deposition Author(s): Zhao, R., Shu, W., Cao, J.M., Zhou, X., Wang, D.P.

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Funding Organization	Location	Grant Number
Other government		2020XM01
Other government		1331KFC
National Natural Science Foundation of China (NSFC)	China	81801858
National Natural Science Foundation of China (NSFC)	China	82170523
Other government		202103021224234

Revision History  

• Version 1.0: 2024-03-06
  Type: Initial release