8IX9

Pseudomoans Aerugiona Wildtype Ketopantoate Reductase with NADPH

PDB DOI: https://doi.org/10.2210/pdb8IX9/pdb

Classification: OXIDOREDUCTASE
Organism(s): Pseudomonas aeruginosa
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2023-03-31 Released: 2024-04-03
Deposition Author(s): Choudhury, G.B., Datta, S.
Funding Organization(s): Council of Scientific & Industrial Research (CSIR)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free: 0.210
R-Value Work: 0.176
R-Value Observed: 0.178

wwPDB Validation 3D Report Full Report

Ligand Structure Quality Assessment

This is version 1.0 of the entry. See complete history.

Literature

KEtopantoate reductase of Pseudomonas

Choudhury, G.B., Dutta, S.

To be published.

Macromolecule Content

Total Structure Weight: 105.45 kDa
Atom Count: 8,027
Modelled Residue Count: 934
Deposited Residue Count: 945
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
2-dehydropantoate 2-reductase	A [auth B], B [auth A], C	315	Pseudomonas aeruginosa	Mutation(s): 0 Gene Names: K3T18_18035
UniProt
Find proteins for Q9I2Y5 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9I2Y5 Go to UniProtKB: Q9I2Y5
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9I2Y5
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
NDP (Subject of Investigation/LOI) Query on NDP Download Ideal Coordinates CCD File SDF format, chain D [auth B] SDF format, chain J [auth A] SDF format, chain M [auth C] MOL2 format, chain D [auth B] MOL2 format, chain J [auth A] MOL2 format, chain M [auth C]	D [auth B], J [auth A], M [auth C]	NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C₂₁ H₃₀ N₇ O₁₇ P₃ ACFIXJIJDZMPPO-NNYOXOHSSA-N		Interactions Focus chain D [auth B] Focus chain J [auth A] Focus chain M [auth C] Interactions & Density Focus chain D [auth B] Focus chain J [auth A] Focus chain M [auth C]
GOL Query on GOL Download Ideal Coordinates CCD File SDF format, chain G [auth B] SDF format, chain H [auth B] SDF format, chain I [auth A] MOL2 format, chain G [auth B] MOL2 format, chain H [auth B] MOL2 format, chain I [auth A]	G [auth B], H [auth B], I [auth A]	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Interactions Focus chain G [auth B] Focus chain H [auth B] Focus chain I [auth A] Interactions & Density Focus chain G [auth B] Focus chain H [auth B] Focus chain I [auth A]
FMT Query on FMT Download Ideal Coordinates CCD File SDF format, chain E [auth B] SDF format, chain F [auth B] SDF format, chain K [auth A] SDF format, chain L [auth A] SDF format, chain N [auth C] SDF format, chain O [auth C] SDF format, chain P [auth C] MOL2 format, chain E [auth B] MOL2 format, chain F [auth B] MOL2 format, chain K [auth A] MOL2 format, chain L [auth A] MOL2 format, chain N [auth C] MOL2 format, chain O [auth C] MOL2 format, chain P [auth C]	E [auth B] F [auth B] K [auth A] L [auth A] N [auth C] E [auth B], F [auth B], K [auth A], L [auth A], N [auth C], O [auth C], P [auth C]	FORMIC ACID C H₂ O₂ BDAGIHXWWSANSR-UHFFFAOYSA-N		Interactions Focus chain E [auth B] Focus chain F [auth B] Focus chain K [auth A] Focus chain L [auth A] Focus chain N [auth C] Focus chain O [auth C] Focus chain P [auth C] Interactions & Density Focus chain E [auth B] Focus chain F [auth B] Focus chain K [auth A] Focus chain L [auth A] Focus chain N [auth C] Focus chain O [auth C] Focus chain P [auth C]