8IW8 | pdb_00008iw8

crystal structure of SulE mutant

• PDB DOI: https://doi.org/10.2210/pdb8IW8/pdb

• Classification: HYDROLASE
• Organism(s): Hansschlegelia zhihuaiae
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2023-03-29 Released: 2024-04-10 
• Deposition Author(s): Liu, B., He, J., Ran, T., Wang, W.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.57 Å
• R-Value Free: 
  0.177 (Depositor), 0.185 (DCC) 
• R-Value Work: 
  0.158 (Depositor), 0.169 (DCC) 

Starting Model: experimental

Literature

crystal structure of SulE mutant

Liu, B., He, J., Ran, T., Wang, W.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content 

• Total Structure Weight: 82.75 kDa 
• Atom Count: 6,273 
• Modeled Residue Count: 698 
• Deposited Residue Count: 740 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Alpha/beta fold hydrolase	A, B	370	Hansschlegelia zhihuaiae	Mutation(s): 1  Gene Names: EK403_17710 EC: 3.1.1
UniProt
Find proteins for G9I933 (Hansschlegelia zhihuaiae) Explore G9I933  Go to UniProtKB:  G9I933

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
TLA (Subject of Investigation/LOI)	C [auth A], E [auth B]	L(+)-TARTARIC ACID C4 H6 O6 FEWJPZIEWOKRBE-JCYAYHJZSA-N
GOL	D [auth A], F [auth B], G [auth B]	GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.57 Å
• R-Value Free:  0.177 (Depositor), 0.185 (DCC) 
• R-Value Work:  0.158 (Depositor), 0.169 (DCC) 

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 50.96	α = 90
b = 139.75	β = 101.55
c = 57.99	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
SCALA	data scaling
PHASER	phasing

Structure Validation

Entry History 

& Funding Information

Deposition Data

• Released Date: 2024-04-10 
Deposition Author(s): Liu, B., He, J., Ran, T., Wang, W.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	31970096

Revision History  

• Version 1.0: 2024-04-10
  Type: Initial release