8IKB

Cryo-EM structure of hnRAC1-2I fibril.

PDB DOI: https://doi.org/10.2210/pdb8IKB/pdb
EM Map EMD-35508: EMDB EMDataResource

Classification: PROTEIN FIBRIL
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2023-02-28 Released: 2024-03-06
Deposition Author(s): Li, D.N., Ma, Y.Y., Li, D., Dai, B., Liu, C.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Aggregation State: FILAMENT
Reconstruction Method: HELICAL

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Cryo-EM structure of hnRAC1-2I fibril.

Li, D.N., Ma, Y.Y., Li, D., Dai, B., Liu, C.

To be published.

Macromolecule Content

Total Structure Weight: 28.27 kDa
Atom Count: 1,764
Modelled Residue Count: 252
Deposited Residue Count: 252
Unique protein chains: 1

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
GLY-PHI-GLY-GLY-ASN-ASP-ASN-PHE-GLY	A [auth D] AA [auth 0] B [auth E] BA [auth 3] C [auth F] A [auth D], AA [auth 0], B [auth E], BA [auth 3], C [auth F], D [auth I], E [auth J], F [auth L], G [auth M], H [auth P], I [auth S], J [auth T], K [auth W], L [auth X], M [auth Z], N [auth a], O [auth c], P [auth d], Q [auth e], R [auth i], S [auth j], T [auth m], U [auth p], V [auth q], W [auth s], X [auth t], Y [auth w], Z [auth x]	9	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for P09651 (Homo sapiens) Explore P09651 Go to UniProtKB: P09651
PHAROS: P09651 GTEx: ENSG00000135486
Entity Groups
UniProt Group	P09651
Sequence Annotations Expand
Reference Sequence

Small Molecules

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
PHI Query on PHI	A [auth D] AA [auth 0] B [auth E] BA [auth 3] C [auth F] A [auth D], AA [auth 0], B [auth E], BA [auth 3], C [auth F], D [auth I], E [auth J], F [auth L], G [auth M], H [auth P], I [auth S], J [auth T], K [auth W], L [auth X], M [auth Z], N [auth a], O [auth c], P [auth d], Q [auth e], R [auth i], S [auth j], T [auth m], U [auth p], V [auth q], W [auth s], X [auth t], Y [auth w], Z [auth x]	L-PEPTIDE LINKING	C₉ H₁₀ I N O₂		PHE

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Aggregation State: FILAMENT
Reconstruction Method: HELICAL

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2024-03-06

Deposition Author(s):

Funding Organization	Location	Grant Number
Not funded		--

Revision History (Full details and data files)

Version 1.0: 2024-03-06
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.