8IK7 | pdb_00008ik7

Cryo-EM structure of hnRAC1 fibril.

PDB DOI: https://doi.org/10.2210/pdb8IK7/pdb
EM Map EMD-35505: EMDB EMDataResource

Classification: RNA BINDING PROTEIN
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2023-02-28 Released: 2024-03-06
Deposition Author(s): Li, D.N., Ma, Y.Y., Li, D., Dai, B., Liu, C.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.69 Å
Aggregation State: FILAMENT
Reconstruction Method: HELICAL

wwPDB Validation 3D Report Full Report

Validation slider image for 8IK7

This is version 1.0 of the entry. See complete history.

Literature

Formed fibrils of hnRNP A1 reversible amyloid core GFGGNDNFG (residues 209-217)

Li, D.N., Ma, Y.Y., Li, D., Dai, B., Liu, C.

To be published.

Macromolecule Content

Total Structure Weight: 21.21 kDa
Atom Count: 1,488
Modeled Residue Count: 216
Deposited Residue Count: 216
Unique protein chains: 1

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
GLY-PHE-GLY-GLY-ASN-ASP-ASN-PHE-GLY	A [auth C] B [auth L] C [auth M] D [auth K] E [auth G] A [auth C], B [auth L], C [auth M], D [auth K], E [auth G], F [auth I], G [auth U], H [auth O], I [auth R], J [auth V], K [auth P], L [auth S], M [auth X], N [auth D], O [auth E], P [auth A], Q [auth B], R [auth N], S [auth J], T [auth F], U [auth H], V [auth W], W [auth Q], X [auth T]	9	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for P09651 (Homo sapiens) Explore P09651 Go to UniProtKB: P09651
PHAROS: P09651 GTEx: ENSG00000135486
Entity Groups
UniProt Group	P09651
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.69 Å
Aggregation State: FILAMENT
Reconstruction Method: HELICAL

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2024-03-06

Deposition Author(s):

Funding Organization	Location	Grant Number
Not funded		--

Revision History (Full details and data files)

Version 1.0: 2024-03-06
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.