8HX0

Cryo-EM structure of MsDps2 from Mycobacterium smegmatis

PDB DOI: https://doi.org/10.2210/pdb8HX0/pdb
EM Map EMD-35070: EMDB EMDataResource

Classification: DNA BINDING PROTEIN
Organism(s): Mycolicibacterium smegmatis MC2 155
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2023-01-03 Released: 2024-07-10
Deposition Author(s): Garg, P., Dutta, S.
Funding Organization(s): Department of Biotechnology (DBT, India), Department of Science & Technology (DST, India)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.90 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Cryo-EM structure of MsDps2 from Mycobacterium smegmatis

Garg, P., Dutta, S.

To be published.

Macromolecule Content

Total Structure Weight: 214.26 kDa
Atom Count: 14,919
Modelled Residue Count: 1,926
Deposited Residue Count: 1,932
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative starvation-induced DNA protecting protein/Ferritin and Dps	A B C D E A, B, C, D, E, F [auth G], G [auth I], H [auth K], I [auth F], J [auth H], K [auth J], L	161	Mycolicibacterium smegmatis MC2 155	Mutation(s): 0 Gene Names: MSMEG_3242, MSMEI_3159
UniProt
Find proteins for A0QXB7 (Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)) Explore A0QXB7 Go to UniProtKB: A0QXB7
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0QXB7
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 2.90 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2024-07-10

Deposition Author(s):

Funding Organization	Location	Grant Number
Department of Biotechnology (DBT, India)	India	--
Department of Science & Technology (DST, India)	India	--

Revision History (Full details and data files)

Version 1.0: 2024-07-10
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.