Structure Of Human Lgi1-Adam22 Complex In Space Group C2
Liu, H.L., Lin, Z.H., Xu, F.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Disintegrin and metalloproteinase domain-containing protein 22 | 486 | Homo sapiens | Mutation(s): 0  Gene Names: ADAM22, MDC2 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9P0K1 (Homo sapiens) Explore Q9P0K1  Go to UniProtKB:  Q9P0K1 | |||||
PHAROS:  Q9P0K1 GTEx:  ENSG00000008277  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9P0K1 | ||||
Glycosylation | |||||
Glycosylation Sites: 3 | Go to GlyGen: Q9P0K1-1 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Leucine-rich glioma-inactivated protein 1 | 526 | Homo sapiens | Mutation(s): 0  Gene Names: LGI1, EPT, UNQ775/PRO1569 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O95970 (Homo sapiens) Explore O95970  Go to UniProtKB:  O95970 | |||||
PHAROS:  O95970 GTEx:  ENSG00000108231  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O95970 | ||||
Glycosylation | |||||
Glycosylation Sites: 3 | Go to GlyGen: O95970-1 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | AA [auth D] CA [auth E] DA [auth E] EA [auth E] G [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | |||
CA Query on CA | BA [auth D] FA [auth E] J [auth A] JA [auth F] K [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 373.503 | α = 90 |
b = 232.369 | β = 94.97 |
c = 80.035 | γ = 90 |
Software Name | Purpose |
---|---|
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |
PHENIX | refinement |
Funding Organization | Location | Grant Number |
---|---|---|
National Natural Science Foundation of China (NSFC) | China | 31270767 |