The crystal structure of Pygo2-LDB1-SSBP2 triple complex
Wang, H.Y., Yan, X.X., Xu, W.Q.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
LIM domain-binding protein 1 | A [auth V] | 230 | Homo sapiens | Mutation(s): 0  Gene Names: LDB1, CLIM2 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q86U70 (Homo sapiens) Explore Q86U70  Go to UniProtKB:  Q86U70 | |||||
PHAROS:  Q86U70 GTEx:  ENSG00000198728  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q86U70 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Single-stranded DNA-binding protein 2 | B [auth A], C [auth B] | 94 | Homo sapiens | Mutation(s): 0  Gene Names: SSBP2, SSDP2 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P81877 (Homo sapiens) Explore P81877  Go to UniProtKB:  P81877 | |||||
PHAROS:  P81877 GTEx:  ENSG00000145687  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P81877 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Pygopus homolog 2 | 27 | Homo sapiens | Mutation(s): 0  Gene Names: PYGO2, PP7910 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9BRQ0 (Homo sapiens) Explore Q9BRQ0  Go to UniProtKB:  Q9BRQ0 | |||||
PHAROS:  Q9BRQ0 GTEx:  ENSG00000163348  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9BRQ0 | ||||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 104.499 | α = 90 |
b = 104.499 | β = 90 |
c = 252.274 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Chinese Academy of Sciences | China | XDB37030302 |
Chinese Academy of Sciences | China | 2021kf01 |
National Natural Science Foundation of China (NSFC) | China | 32000862 |
National Natural Science Foundation of China (NSFC) | China | 32171218 |
Other government | BX20200351 |