8HFW | pdb_00008hfw

The crystal structure of alpha/beta fold hydrolase

• PDB DOI: https://doi.org/10.2210/pdb8HFW/pdb

• Classification: HYDROLASE
• Organism(s): Burkholderia pyrrocinia
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2022-11-12 Released: 2023-05-24 
• Deposition Author(s): Lu, H., Xu, Y.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.66 Å
• R-Value Free: 
  0.229 (Depositor) 
• R-Value Work: 
  0.194 (Depositor) 

Starting Model: experimental

Literature

The crystal structure of alpha/beta fold hydrolase

Lu, H., Xu, Y.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Biological Assembly 2  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 97.21 kDa 
• Atom Count: 6,318 
• Modeled Residue Count: 846 
• Deposited Residue Count: 912 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Alpha/beta fold hydrolase	A, B, C	304	Burkholderia pyrrocinia	Mutation(s): 0  Gene Names: EVG18_06755
UniProt
Find proteins for A0AA82WPH3 (Burkholderia pyrrocinia) Explore A0AA82WPH3  Go to UniProtKB:  A0AA82WPH3

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.66 Å
• R-Value Free:  0.229 (Depositor) 
• R-Value Work:  0.194 (Depositor) 

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 166.96	α = 90
b = 68.41	β = 93.575
c = 75.34	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
XDS	data reduction
XSCALE	data scaling
BALBES	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2023-05-24 
Deposition Author(s): Lu, H., Xu, Y.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	31830069

Revision History  

• Version 1.0: 2023-05-24
  Type: Initial release
  
• Version 1.1: 2023-11-08
  Changes: Data collection, Refinement description