Crystal structure of BCOR/PCGF1/KDM2B complex
Shen, F., Chen, R., Xu, J., Liu, J.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
cDNA FLJ55590, highly similar to JmjC domain-containing histone demethylation protein 1B | 235 | Homo sapiens | Mutation(s): 0  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q8NHM5 (Homo sapiens) Explore Q8NHM5  Go to UniProtKB:  Q8NHM5 | |||||
PHAROS:  Q8NHM5 GTEx:  ENSG00000089094  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8NHM5 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Polycomb group RING finger protein 1 | 105 | Homo sapiens | Mutation(s): 0  Gene Names: PCGF1, NSPC1, RNF68 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9BSM1 (Homo sapiens) Explore Q9BSM1  Go to UniProtKB:  Q9BSM1 | |||||
PHAROS:  Q9BSM1 GTEx:  ENSG00000115289  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9BSM1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
BCL-6 corepressor | 142 | Homo sapiens | Mutation(s): 0  Gene Names: BCOR, KIAA1575 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q6W2J9 (Homo sapiens) Explore Q6W2J9  Go to UniProtKB:  Q6W2J9 | |||||
PHAROS:  Q6W2J9 GTEx:  ENSG00000183337  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q6W2J9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ACY (Subject of Investigation/LOI) Query on ACY | D [auth A], E [auth A] | ACETIC ACID C2 H4 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 67.291 | α = 90 |
b = 67.291 | β = 90 |
c = 252.035 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
Aimless | data scaling |
MOLREP | phasing |
PDB_EXTRACT | data extraction |
XDS | data reduction |
Funding Organization | Location | Grant Number |
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National Basic Research Program of China (973 Program) | China | 2017YFA0504104 |