8GXT | pdb_00008gxt

Antibacterial peptide, mehamycin

PDB DOI: https://doi.org/10.2210/pdb8GXT/pdb

Classification: ANTIMICROBIAL PROTEIN
Organism(s): Meloidogyne hapla
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2022-09-21 Released: 2023-09-27
Deposition Author(s): Isozumi, N., Ohki, S.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 8GXT

This is version 1.1 of the entry. See complete history.

Literature

Antibacterial peptide, mehamycin

Ohki, S., Isozumi, N.

To be published.

Macromolecule Content

Total Structure Weight: 7.08 kDa
Atom Count: 494
Modeled Residue Count: 61
Deposited Residue Count: 61
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Antibacterial peptide	A	61	Meloidogyne hapla	Mutation(s): 0
UniProt
Find proteins for A0A1I8C2Q5 (Meloidogyne hapla) Explore A0A1I8C2Q5 Go to UniProtKB: A0A1I8C2Q5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A1I8C2Q5
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2023-09-27

Deposition Author(s):

Funding Organization	Location	Grant Number
Not funded		--

Revision History (Full details and data files)

Version 1.0: 2023-09-27
Type: Initial release
Version 1.1: 2024-10-30
Changes: Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.