SLC collection of antibiotic analogs
Yeon, S.K., Pellegrino, J., Lee, D.J., Seiple, I.B., Fraser, J.S.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L2 | C [auth K] | 271 | Escherichia coli | Mutation(s): 0  Gene Names: rplB, b3317, JW3279 | ![]() |
UniProt | |||||
Find proteins for P60422 (Escherichia coli (strain K12)) Explore P60422  Go to UniProtKB:  P60422 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P60422 | ||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L15 | D [auth L] | 144 | Escherichia coli | Mutation(s): 0  Gene Names: rplO | ![]() |
UniProt | |||||
Find proteins for P02413 (Escherichia coli (strain K12)) Explore P02413  Go to UniProtKB:  P02413 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02413 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 5 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L4 | E [auth M] | 201 | Escherichia coli | Mutation(s): 0  Gene Names: rplD, ECMG_02584 | ![]() |
UniProt | |||||
Find proteins for P60723 (Escherichia coli (strain K12)) Explore P60723  Go to UniProtKB:  P60723 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P60723 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 6 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L3 | F [auth N] | 209 | Escherichia coli | Mutation(s): 0  Gene Names: rplC, b3320, JW3282 | ![]() |
UniProt | |||||
Find proteins for P60438 (Escherichia coli (strain K12)) Explore P60438  Go to UniProtKB:  P60438 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P60438 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 7 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L13 | G [auth O] | 142 | Escherichia coli | Mutation(s): 0  Gene Names: rplM, A1UI_03510 | ![]() |
UniProt | |||||
Find proteins for P0AA10 (Escherichia coli (strain K12)) Explore P0AA10  Go to UniProtKB:  P0AA10 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AA10 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 8 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L22 | H [auth P] | 110 | Escherichia coli | Mutation(s): 0  Gene Names: rplV, eryB, b3315, JW3277 | ![]() |
UniProt | |||||
Find proteins for P61175 (Escherichia coli (strain K12)) Explore P61175  Go to UniProtKB:  P61175 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P61175 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 9 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L32 | I [auth Q] | 56 | Escherichia coli | Mutation(s): 0  Gene Names: rpmF, ECDEC2D_1303 | ![]() |
UniProt | |||||
Find proteins for P0A7N4 (Escherichia coli (strain K12)) Explore P0A7N4  Go to UniProtKB:  P0A7N4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7N4 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 10 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L34 | J [auth R] | 46 | Escherichia coli | Mutation(s): 0  Gene Names: rpmH | ![]() |
UniProt | |||||
Find proteins for P0A7P5 (Escherichia coli (strain K12)) Explore P0A7P5  Go to UniProtKB:  P0A7P5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7P5 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 1 | |||||
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Molecule | Chains | Length | Organism | Image | |
23S ribosomal RNA | A [auth I] | 2,904 | Escherichia coli | ![]() | |
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
5S ribosomal RNA | B [auth J] | 118 | Escherichia coli | ![]() | |
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
UIF (Subject of Investigation/LOI) Query on UIF | K [auth I] | [(2~{S},3~{S},4~{R},6~{R})-4-[[2-[[(5~{S})-3-[3-fluoranyl-4-[6-(2-methyl-1,2,3,4-tetrazol-5-yl)pyridin-3-yl]phenyl]-2-oxidanylidene-1,3-oxazolidin-5-yl]methylamino]-2-oxidanylidene-ethyl]-methyl-amino]-6-methyl-2-(phenylcarbonyloxy)oxan-3-yl] benzoate C40 H39 F N8 O8 JILVZTUUGIPBMT-XQRKQDBVSA-N |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | GM123159 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | GM124149 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | GM128656 |