Cryo-EM structure of the human GBP1 dimer bound to GDP-AlF3
Kuhm, T.I., de Agrela Pinto, C., Taisne, C., Huber, S., Giannopolou, N., Pardon, E., Steyaert, J., Jakobi, A.J.To be published.
Experimental Data Snapshot
Starting Models: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Guanylate-binding protein 1 | 592 | Homo sapiens | Mutation(s): 0  Gene Names: GBP1 EC: 3.6.5 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P32455 (Homo sapiens) Explore P32455  Go to UniProtKB:  P32455 | |||||
PHAROS:  P32455 GTEx:  ENSG00000117228  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P32455 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GDP (Subject of Investigation/LOI) Query on GDP | C [auth A], F [auth B] | GUANOSINE-5'-DIPHOSPHATE C10 H15 N5 O11 P2 QGWNDRXFNXRZMB-UUOKFMHZSA-N | |||
AF3 (Subject of Investigation/LOI) Query on AF3 | D [auth A], G [auth B] | ALUMINUM FLUORIDE Al F3 KLZUFWVZNOTSEM-UHFFFAOYSA-K | |||
MG (Subject of Investigation/LOI) Query on MG | E [auth A], H [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Task | Software Package | Version |
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RECONSTRUCTION | cryoSPARC | 3.3 |
MODEL REFINEMENT | REFMAC | 5 |
Funding Organization | Location | Grant Number |
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European Research Council (ERC) | European Union | 852880 |
Netherlands Organisation for Scientific Research (NWO) | Netherlands | NWO.STU.018-2.007 |