8CPE

CryoEM structure of AL55 amyloid fibrils extracted from the kidney of an AL amyloidosis patient.


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.00 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

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Literature

The Cryo-EM STRUCTURE of Renal Amyloid Fibril Suggests Structurally Homogeneous Multiorgan Aggregation in AL Amyloidosis.

Puri, S.Schulte, T.Chaves-Sanjuan, A.Mazzini, G.Caminito, S.Pappone, C.Anastasia, L.Milani, P.Merlini, G.Bolognesi, M.Nuvolone, M.Palladini, G.Ricagno, S.

(2023) J Mol Biol 435: 168215-168215

  • DOI: https://doi.org/10.1016/j.jmb.2023.168215
  • Primary Citation of Related Structures:  
    8CPE

  • PubMed Abstract: 

    Immunoglobulin light chain amyloidosis (AL) is caused by the aberrant production of amyloidogenic light chains (LC) that accumulate as amyloid deposits in vital organs. Distinct LC sequences in each patient yield distinct amyloid structures. However different tissue microenvironments may also cause identical protein precursors to adopt distinct amyloid structures. To address the impact of the tissue environment on the structural polymorphism of amyloids, we extracted fibrils from the kidney of an AL patient (AL55) whose cardiac amyloid structure was previously determined by our group. Here we show that the 4.0 Å resolution cryo-EM structure of the renal fibril is virtually identical to that reported for the cardiac fibril. These results provide the first structural evidence that LC amyloids independently deposited in different organs of the same AL patient share a common fold.


  • Organizational Affiliation

    Department of Biosciences, Università degli Studi di Milano, Milan, Italy. Electronic address: https://twitter.com/@Saritapuri1504.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Immunoglobulin lambda light chainA [auth C],
B [auth A],
C [auth B],
D,
E
217Homo sapiensMutation(s): 0 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.00 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION3.1
MODEL REFINEMENTPHENIX

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Other governmentItaly20207XLJB2

Revision History  (Full details and data files)

  • Version 1.0: 2023-08-16
    Type: Initial release