Download MendeleyRhs2-CT endonuclease toxin in complex with cognate immunity protein RhsI2
Pankov, G., Coulthurst, C., Hunter, W.N.To be published.
8CM0
Rhs2-CT endonuclease toxin in complex with cognate immunity protein RhsI2
- PDB DOI: https://doi.org/10.2210/pdb8CM0/pdb
- Classification: ANTIMICROBIAL PROTEIN
- Organism(s): Serratia marcescens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2023-02-17 Released: 2024-08-28
- Funding Organization(s): Wellcome Trust
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.17 Å
- R-Value Free: 0.253
- R-Value Work: 0.195
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| RhsI2 | A [auth BBB] | 162 | Serratia marcescens | Mutation(s): 0 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Rhs2CT | B [auth AAA] | 162 | Serratia marcescens | Mutation(s): 0 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | C [auth BBB] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| ACT Query on ACT | D [auth AAA], E [auth AAA], F [auth AAA] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.17 Å
- R-Value Free: 0.253
- R-Value Work: 0.195
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 37.006 | α = 90 |
| b = 81.931 | β = 90 |
| c = 101.371 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| xia2 | data scaling |
| PHASES | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-08-28 Deposition Author(s): Pankov, G., Hunter, W.N., Coulthurst, S.J.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Wellcome Trust | United Kingdom | 215599/Z/19/Z |
| Wellcome Trust | United Kingdom | 220321/Z/20/Z |
Revision History (Full details and data files)
- Version 1.0: 2024-08-28
Type: Initial release
