Crystal structure of RNA/2'-O-methyl-RNA heteroduplex
Dolot, R.M., Maciaszek, A., Mikolajczyk, B., Nawrot, B.C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 1 | |||||
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Molecule | Chains | Length | Organism | Image | |
RNA (5'-R(*G*UP*CP*UP*CP*CP*UP*AP*GP*)-3') | A, C [auth B], E [auth C] | 9 | synthetic construct | ||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
RNA (5'-R(*(UZL)*(OMU)P*(A2M)P*(OMG)P*(OMG)P*(A2M)P*(OMG)P*(A2M)P*(OMC)P*)-3') | B [auth D], D [auth E], F | 9 | synthetic construct | ||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | G [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
K Query on K | H [auth D] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 30.103 | α = 90 |
b = 49.303 | β = 97.149 |
c = 55.868 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
CrysalisPro | data reduction |
Aimless | data scaling |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
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Not funded | -- |