A complex of cagX and cagY components of Helicobacter pylori type IV secretion system
Isupov, M.N., Jiang, M.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cag pathogenicity island protein | A [auth AAA], C [auth CCC] | 164 | Helicobacter pylori | Mutation(s): 0  Gene Names: HP0528 | |
UniProt | |||||
Find proteins for Q75X32 (Helicobacter pylori) Explore Q75X32  Go to UniProtKB:  Q75X32 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q75X32 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Type IV secretion system apparatus protein CagY (Fragment) | B [auth BBB], D [auth DDD] | 264 | Helicobacter pylori | Mutation(s): 0  Gene Names: cagY | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CA (Subject of Investigation/LOI) Query on CA | E [auth CCC] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 55.059 | α = 90 |
b = 196.123 | β = 90 |
c = 200.128 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
XDS | data reduction |
XSCALE | data scaling |
CRANK2 | phasing |
MOLREP | phasing |
DM | phasing |
Coot | model building |
BUSTER | refinement |
ISOLDE | refinement |
Funding Organization | Location | Grant Number |
---|---|---|
National Natural Science Foundation of China (NSFC) | China | -- |